Gene Ssed_2640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2640 
Symbol 
ID5613097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3195447 
End bp3195818 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content47% 
IMG OID640933559 
Productdiacylglycerol kinase 
Protein accessionYP_001474375 
Protein GI157375775 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0818] Diacylglycerol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.185704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0499107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTG AAAATAATCA CGGATTAAAA CGCATATTTA GGGCCACAGG GTTCTCCATG 
CAGGGACTCA GGCTAGCATG GGTGCATGAA GCCGCATTCA GGCAAGAATT GATGTTAGCC
ATCATTATGC TGCCGATAGC GCTTTTGGTT GATATCACCA CAGTTGAGCG ACTCTTTTTA
ATTTTGACCC TCTTTATTGT CCTCATCGTA GAGTTGTTAA ATTCGGCAAT AGAGGCCGTG
GTCGACAGGA TTGGTCATGA GATACACCCT CTGAGTGGCC AAGCCAAAGA TGTCGCTTCA
GCCGCCGTAT TTATGAGTCT GGCCTTATGT GGCATTACCT GGGCTGTCAT ACTTACAAGC
CGATACCTCT GA
 
Protein sequence
MKPENNHGLK RIFRATGFSM QGLRLAWVHE AAFRQELMLA IIMLPIALLV DITTVERLFL 
ILTLFIVLIV ELLNSAIEAV VDRIGHEIHP LSGQAKDVAS AAVFMSLALC GITWAVILTS
RYL