Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2640 |
Symbol | |
ID | 5613097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 3195447 |
End bp | 3195818 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640933559 |
Product | diacylglycerol kinase |
Protein accession | YP_001474375 |
Protein GI | 157375775 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0818] Diacylglycerol kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.185704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0499107 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTG AAAATAATCA CGGATTAAAA CGCATATTTA GGGCCACAGG GTTCTCCATG CAGGGACTCA GGCTAGCATG GGTGCATGAA GCCGCATTCA GGCAAGAATT GATGTTAGCC ATCATTATGC TGCCGATAGC GCTTTTGGTT GATATCACCA CAGTTGAGCG ACTCTTTTTA ATTTTGACCC TCTTTATTGT CCTCATCGTA GAGTTGTTAA ATTCGGCAAT AGAGGCCGTG GTCGACAGGA TTGGTCATGA GATACACCCT CTGAGTGGCC AAGCCAAAGA TGTCGCTTCA GCCGCCGTAT TTATGAGTCT GGCCTTATGT GGCATTACCT GGGCTGTCAT ACTTACAAGC CGATACCTCT GA
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Protein sequence | MKPENNHGLK RIFRATGFSM QGLRLAWVHE AAFRQELMLA IIMLPIALLV DITTVERLFL ILTLFIVLIV ELLNSAIEAV VDRIGHEIHP LSGQAKDVAS AAVFMSLALC GITWAVILTS RYL
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