| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2635 |
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| Symbol | |
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| ID | 5613162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3189273 |
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| End bp | 3190829 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933554 |
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| Product | sulphate transporter |
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| Protein accession | YP_001474370 |
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| Protein GI | 157375770 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000740978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0190825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATC TCATTCGTCA CAAAACTTCC AGCAGCAAAG CCGATCTTCT ATCGGGCTTA
ACTGTGGCAC TTGCACTTAT TCCTGAAGCC GTTGCATTCG CTTTCGTCGC AGGTGTTGAG
CCTATGGTGG GCTTATATGC CGCCTTTATT ATGGGGCTTA TCACTGCGCT TATTGGCGGT
CGTCCAGGTA TGATCTCGGG TGCTACGGGC GCTATGGCTG TTGTTATGGT TGCTTTGGTC
GCTGAACACG GAGTGCAATA CCTCTTTGCC GCAGTCGTTC TGGCCGGCCT CATTCAAGTC
TCCTTTGGTC TACTGAAATT AGGTAAGTTC ATTCGAATCG TTCCTTACCC TGTGATGATC
GGTTTTGTTA ACGGACTGGC GATTGTTATT TTTCTTGCCC AACTTGGGCA ATTTAAGGTA
CCTGACGCGG ATGGTGTATT AACCTGGTTG CCTCAAGGCC AGTTAATGCT GATGATGGGC
CTTGTACTGT TAACGATGGC GATTATTCAG TTTTTACCAA AGCTCACCAC TGCCATCCCC
TCTTCGTTGG CAGCAATCGT GACAGTCACC TTAATGGTCG TGTTTTTAGA GCTTGATACC
CGCACCGTTT TAGATTTCCT GAAATCCATG AGTGGTGATG AAAATGCGAC CATTGCCGGA
AGTCTACCTA GCTTCTCTAT TCCTGCCGTT GCATTTAATC TCGAAACGCT ATACATCATT
CTTCCATACT CTCTGATCTT GGCAGCTGTA GGCTTGATAG AATCTTTGCT TACACTGACC
GTTATCGATG AGATGACAAA CACGCGTGGT AAAGGAAACA AAGAGTGTAT CGGCCAAGGT
GTTGGTAATA TTACCAGTGG CTTCTTTGGT GCCATGGGTG GTTGTGCCAT GATTGGTCAG
TCTATGATTA ACATCAACTC TGGTGGTCGT GGACGTTTAT CTGGTATCAC TGCGGCACTT
GCCCTACTCG CCTTTATCCT TTTCGGTTCT GCACTCATCG AAATGATCCC GTTAGCAGCA
CTCGTCGGTG TGATGTTTAT GGTTGTGCTT GGTACCTTCG AATGGGCCAG CTTTAAGGTG
ATGAGCAAAG TACCTAAACA CGATGCTTTT GTCATCATAC TGGTCACTAT CGTCACCGTA
TTTACTGACT TAGCTTTCGC CGTTTTCGTC GGTGTTATCG TATCTGCCCT GGTTTTTGCC
TGGGAGCATG CGAAGCACAT CAATGTAGAG ATCAGCGAAG ATGCTAATGG TTGGAAAGTA
TACAAGCTTA ATGGACCACT ATTTTTTGGT TCAGCCGCCG AGTTTTTAGA GCTTTTCCAC
TCAAATACCG ATCCTGTCGA TGTGATTGTT GATTTCCAAA ATTCTCGGGT ATGTGATCAC
TCGGCACTGG ATGCCATCGA TACCCTTGCA GAGCGCTATG GTTCAAACGG TAAAAAACTG
CACCTACGCC ATCTCAGTAA TGACTGTAAG AAGTTACTAC ACAAGGCAGG CGATCTGGTT
GAAGTTAACC TTATCGAAGA TCCTCACTAC AAAATTGCCG ACGATAAATT AGATTAA
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| Protein sequence | MFDLIRHKTS SSKADLLSGL TVALALIPEA VAFAFVAGVE PMVGLYAAFI MGLITALIGG
RPGMISGATG AMAVVMVALV AEHGVQYLFA AVVLAGLIQV SFGLLKLGKF IRIVPYPVMI
GFVNGLAIVI FLAQLGQFKV PDADGVLTWL PQGQLMLMMG LVLLTMAIIQ FLPKLTTAIP
SSLAAIVTVT LMVVFLELDT RTVLDFLKSM SGDENATIAG SLPSFSIPAV AFNLETLYII
LPYSLILAAV GLIESLLTLT VIDEMTNTRG KGNKECIGQG VGNITSGFFG AMGGCAMIGQ
SMININSGGR GRLSGITAAL ALLAFILFGS ALIEMIPLAA LVGVMFMVVL GTFEWASFKV
MSKVPKHDAF VIILVTIVTV FTDLAFAVFV GVIVSALVFA WEHAKHINVE ISEDANGWKV
YKLNGPLFFG SAAEFLELFH SNTDPVDVIV DFQNSRVCDH SALDAIDTLA ERYGSNGKKL
HLRHLSNDCK KLLHKAGDLV EVNLIEDPHY KIADDKLD
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