Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2630 |
Symbol | |
ID | 5613615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 3181104 |
End bp | 3181694 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640933549 |
Product | maf protein |
Protein accession | YP_001474365 |
Protein GI | 157375765 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0424] Nucleotide-binding protein implicated in inhibition of septum formation |
TIGRFAM ID | [TIGR00172] MAF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000394962 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000875117 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCATCTC AGATTATTTT AGCTTCAACA TCATCATATC GGAAAGAGAT ACTATCTAAG CTAGGCATTC CTTTTTGTAC TTGCTCACCA GATATTGATG AAACTCCGCT CAAACAAGAG ACGCCGGAAG CACATGTTGT TCGACTCGCT AAGGATAAAG CCCGCGTTGG TGCAGACTTA TTTACACAAG GTCTTGTGAT TGGCTCCGAT CAGGTTGCCG TGATCAATGG CGAGATTGTC GGCAAACCGA TAAATCATGA GGCCGCAGTA TCTCAGTTAA CTGCAGCGTC CAATCAAGTG ATCACCTTCT ATACGGGTAT TGCACTTCAC AATATCACCA CCGGTGAGTG CGAAGCCCAC TGTGAAACAT TTCGGGTTCA TTTTAGAGCA TTAACCACAG CGCAAATAGA ATACTACCTG AAGAAAGAGC AGCCATATTT CTGCGCTGGT AGCTTTAAAA GTGAAGGCTT AGGTATTGCC TTGTTTAATC AATTAGAGGG GAAAGACCCC AACACATTAA TCGGACTCCC CTTGATAACG CTCATCGATA TGCTTTCTCG TCAAGGTTAT GTGGTCCTGG ACCATCATTA A
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Protein sequence | MPSQIILAST SSYRKEILSK LGIPFCTCSP DIDETPLKQE TPEAHVVRLA KDKARVGADL FTQGLVIGSD QVAVINGEIV GKPINHEAAV SQLTAASNQV ITFYTGIALH NITTGECEAH CETFRVHFRA LTTAQIEYYL KKEQPYFCAG SFKSEGLGIA LFNQLEGKDP NTLIGLPLIT LIDMLSRQGY VVLDHH
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