| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2627 |
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| Symbol | |
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| ID | 5613233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3179010 |
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| End bp | 3180038 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933546 |
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| Product | putative glycerol-3-phosphate acyltransferase PlsX |
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| Protein accession | YP_001474362 |
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| Protein GI | 157375762 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000177563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000353311 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTAATC TGACGCTTGC GTTAGATGCG ATGGGGGGCG ATTATGGTCC CCGCATCACA
GTGCCTGCAG CCTTGCAGGC ACTTCGTTTA TATTCCTTTC TAAATTTTTA TCTTGTTGGT
AATAAGACAG ACATTGAGAA ATACCTTTCT CAGGTTGAGT CTGATGTTCT TCGACGCATT
GAAATCATTC ATACGACAGA AGTTGTCACC ATGTCTGACC GTCCTGCACA TGCGCTCAGA
AACAGAAAAC AAAGCTCTAT GAGGCTGGCA ATTGAGTTAG TCAGAGATGG CAAAGCCCAA
GCCTGTCTAA GTGCCGGTAA TACCGGTGCG CTGATGGCTA TGTCAAAAGT GTTGCTTAAA
ACGCTTCCGG GTATTGACAG GCCTGCGCTT GTGAGTTGTC TACCCGCTGT TAATAAAACA
CCGGTTTACC TTCTCGACTT AGGTGCCAAT GTCTCTTGTT GCTCTGAAAC ACTCTTTCAG
TTTGCCGTTA TGGGTTCTGT GTTATGTGAG GCTGTTGACA AGAACTGTTC GCCCAAGGTC
GCTCTGCTTA ATGTCGGCAT TGAAGAGATC AAGGGAAATG ATCAAGTACA ACAAGCGGGT
CAACTTTTAC AACAAAGTCC ACAGATCAAT TATACTGGTT TCATTGAAGG GAACGATCTC
TTTTCCGGCC GTGTCGATGT GATTGTTTGT GATGGCTTTG TAGGTAACAT CACTTTAAAG
ACATCTGAAG GTATAGCTCG TTTATTGGTG CATCAATTAG AAAAGGGCCT TACCAAAGGT
TTTTTTGTAC GGTTAATGGC CAAAATGATC GCTCCCCGTA TAAATTCTGT CCTAAATCAG
ATGAACCCCG ACCACTACAA CGGCGCAAGT TTGATAGGAT TGCGCGGAAT TGTAGTAAAA
AGTCATGGAA GTGCCGATGA ATCTGCTTAT TTACAAGCAA TTAGTCTAGC TGTTACAGAG
GCACAACGTC GACTCCCTCA GATGATTGAA GAACGTCTCG AGTCGATTCT TTTAGACATT
AATAACTGA
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| Protein sequence | MTNLTLALDA MGGDYGPRIT VPAALQALRL YSFLNFYLVG NKTDIEKYLS QVESDVLRRI
EIIHTTEVVT MSDRPAHALR NRKQSSMRLA IELVRDGKAQ ACLSAGNTGA LMAMSKVLLK
TLPGIDRPAL VSCLPAVNKT PVYLLDLGAN VSCCSETLFQ FAVMGSVLCE AVDKNCSPKV
ALLNVGIEEI KGNDQVQQAG QLLQQSPQIN YTGFIEGNDL FSGRVDVIVC DGFVGNITLK
TSEGIARLLV HQLEKGLTKG FFVRLMAKMI APRINSVLNQ MNPDHYNGAS LIGLRGIVVK
SHGSADESAY LQAISLAVTE AQRRLPQMIE ERLESILLDI NN
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