Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2625 |
Symbol | |
ID | 5613649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3177059 |
End bp | 3177988 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640933544 |
Product | malonyl CoA-acyl carrier protein transacylase |
Protein accession | YP_001474360 |
Protein GI | 157375760 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000014528 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000014199 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGATGGAAA ATTTTGCTTT TATTTTTCCA GGTCAAGGTT CTCAAGCGAT TGGGATGTTG GCCGACCTTG CGTCAGAGCA TCAAATCGTT GCTGACACAT TTTCTCAAGC GAGTGAAGTA TTAGGTTATG ATCTGTGGGA ACTTGTTCAA CAAGGTCCAG TCGAAACGCT GAATGAAACA GATAAGACTC AGCCTGCACT GCTTACCGCG AGTGTTGCCA TTTGGCGAGC CTATGAAGCT ACCGGTAAGG CAATGCCTGC AGTGCTTGCC GGCCATAGCT TAGGTGAATA TTCTGCACTT GTTTGTGCGG GTGTGATCGA CTTTATCGAT GCCGTCAAAC TCGTAGAATT ACGAGGTCAA CTGATGCAAC AAGCCGTGCC GGCAGGCAGC GGTGCTATGT TCGCAATTAT CGGTTTAGAT AACGAGTCTA TTGCAAAGGC ATGTGAAGAA GCCGCACAGG GTGAAATAGT GAGTCCTGTG AACTATAACA GTCCTGGACA AGTTGTTATT GCCGGAAGTA AAGCAGCAGT AGAAAGAGCT GCAGGCTTGT GCAAAGACAA TGGTGCCAAA ATGGCGGTAG CCCTTCCCGT TAGCGTACCC TCACATTGTG AATTGATGCG TCCGGCAGCA GAAAAGCTAG CGTTGGCACT TGAGGCTATC GAGTTTAAAA CTCCCAAAGT AAAAGTGATC AATAACGTCG ATGTTGCCAG TCCTGAAACT GCGACAGAGA TCAAAGATGC CTTGGTCAGA CAACTATATT GTCCTGTCAG GTGGTCTGAT AGTGTGACTG ATATGTCTGA AGGTGGCATC ACTCATCTTT ATGAGGTTGG GCCGGGTAAA GTGTTAACCG GGTTGGCAAA ACGAATTAAT CGATCGCTTA CTGCAAAAGC GGTCAACGAT GCTGCATCAT TCGCTGCATT GACCGAATAG
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Protein sequence | MMENFAFIFP GQGSQAIGML ADLASEHQIV ADTFSQASEV LGYDLWELVQ QGPVETLNET DKTQPALLTA SVAIWRAYEA TGKAMPAVLA GHSLGEYSAL VCAGVIDFID AVKLVELRGQ LMQQAVPAGS GAMFAIIGLD NESIAKACEE AAQGEIVSPV NYNSPGQVVI AGSKAAVERA AGLCKDNGAK MAVALPVSVP SHCELMRPAA EKLALALEAI EFKTPKVKVI NNVDVASPET ATEIKDALVR QLYCPVRWSD SVTDMSEGGI THLYEVGPGK VLTGLAKRIN RSLTAKAVND AASFAALTE
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