Gene Ssed_2621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2621 
Symbol 
ID5610677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3173793 
End bp3174161 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content46% 
IMG OID640933540 
Producthypothetical protein 
Protein accessionYP_001474356 
Protein GI157375756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000188685 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000265453 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTAAATC TTACTGTACT TCCCCTACTG CCGCTTGTCG GTGCGTTAAC GGCAAACCTG 
AATGAGCTTA TAAGAGGTGA GACTGTCAAT GTCCACCCGA AGTTAACTAT TGGAATGAAA
ACCTTCAGTG TTGCCGCTGC AGGCTTTGCT ATCGTGTGGT TTGCCCTGCT GGTGACGGCC
ATTTATGCCG GAGGTGAGGC TGATAACATC GCTGGTATCG AGGTGTTGAT GCTTTTCTTA
GCCGGCTTCT TTATTCATTC CGGAATCCAT GCCTCGCGCT TATTGAGTGA ACGTGCACAG
CTATGGGTTT ACCGACTCTC AATTCCTTTC ATTCTCGTTT CAAGTTTAAT CGTTCTAAAA
TTTGGCTAA
 
Protein sequence
MLNLTVLPLL PLVGALTANL NELIRGETVN VHPKLTIGMK TFSVAAAGFA IVWFALLVTA 
IYAGGEADNI AGIEVLMLFL AGFFIHSGIH ASRLLSERAQ LWVYRLSIPF ILVSSLIVLK
FG