Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2621 |
Symbol | |
ID | 5610677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3173793 |
End bp | 3174161 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640933540 |
Product | hypothetical protein |
Protein accession | YP_001474356 |
Protein GI | 157375756 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000188685 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000265453 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTAAATC TTACTGTACT TCCCCTACTG CCGCTTGTCG GTGCGTTAAC GGCAAACCTG AATGAGCTTA TAAGAGGTGA GACTGTCAAT GTCCACCCGA AGTTAACTAT TGGAATGAAA ACCTTCAGTG TTGCCGCTGC AGGCTTTGCT ATCGTGTGGT TTGCCCTGCT GGTGACGGCC ATTTATGCCG GAGGTGAGGC TGATAACATC GCTGGTATCG AGGTGTTGAT GCTTTTCTTA GCCGGCTTCT TTATTCATTC CGGAATCCAT GCCTCGCGCT TATTGAGTGA ACGTGCACAG CTATGGGTTT ACCGACTCTC AATTCCTTTC ATTCTCGTTT CAAGTTTAAT CGTTCTAAAA TTTGGCTAA
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Protein sequence | MLNLTVLPLL PLVGALTANL NELIRGETVN VHPKLTIGMK TFSVAAAGFA IVWFALLVTA IYAGGEADNI AGIEVLMLFL AGFFIHSGIH ASRLLSERAQ LWVYRLSIPF ILVSSLIVLK FG
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