| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2620 |
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| Symbol | |
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| ID | 5610676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3173214 |
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| End bp | 3173696 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640933539 |
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| Product | cytosolic long-chain acyl-CoA thioester hydrolase family protein |
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| Protein accession | YP_001474355 |
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| Protein GI | 157375755 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1607] Acyl-CoA hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000119255 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000252749 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGGTA AAGAGCGAGC GATAACCTTA AGGTTTTTGG CAGAGCCTGC TGATGTGAAC
TTCGGTGGTA AGGTACACGG CGGTGCGGTC ATGAAGTGGA TCGATTTAGC CGCTTATGCG
TGCTCGGCGG GCTGGAGTGG TAAGTACTGT ATCACTGCCT ACGCCGGTGG GATCCGCTTC
GTGAAGCCGA TCCATGTGGG CAATATTGTC GAAACGACGG CGAAAGTAAT CTATACGGGT
CGGTCATCGA TGCATCTGGG GATTGATGTG CGTGCCGGAG ACCCTAAGAA CTCTGAACGT
CATTTGACCA CTCACTGTGT TGTGATTATG GTCGCGGTTG ATGATGCTGG ACATCCCACC
GAAGTGCCTG AGTGGGTGCC TCAAACAGAT GAAGATATTA AGTTGCGTGA TTCGGCCATT
CGATTGATGG AGATGCGTAA AAAAATTGGT GCCGAGATGG AAGCCCATGT AAGCCAGGCT
TAA
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| Protein sequence | MAGKERAITL RFLAEPADVN FGGKVHGGAV MKWIDLAAYA CSAGWSGKYC ITAYAGGIRF
VKPIHVGNIV ETTAKVIYTG RSSMHLGIDV RAGDPKNSER HLTTHCVVIM VAVDDAGHPT
EVPEWVPQTD EDIKLRDSAI RLMEMRKKIG AEMEAHVSQA
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