| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2614 |
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| Symbol | |
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| ID | 5610735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3167275 |
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| End bp | 3167481 |
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| Gene Length | 207 bp |
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| Protein Length | 68 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933533 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001474349 |
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| Protein GI | 157375749 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0114712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCAAG TTACTGGCGT TGTTAAGTGG TTCAACTCTG ACAAAGGTTT TGGATTTATC
GAGCAAGAGT CTGGTCCAGA CGTTTTTGTT CACTTCCGTG CAATCAACTC TGACGGTTTC
AAAACTCTTG ACGAAGGTCA GAAAGTACAA TTCACTGTGA CTCAAGGTCA GAAAGGTCCA
CAAGCTGAAA ACGTAACTAT CGTTTAG
|
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| Protein sequence | MSQVTGVVKW FNSDKGFGFI EQESGPDVFV HFRAINSDGF KTLDEGQKVQ FTVTQGQKGP
QAENVTIV
|
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