Gene Ssed_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2604 
Symbol 
ID5610365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3156805 
End bp3157161 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content41% 
IMG OID640933523 
Producthypothetical protein 
Protein accessionYP_001474339 
Protein GI157375739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.510328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACAG ATAAAGATGG GTATATGCAT CTCATTCAGT TCCTCTCAGA GCATTTAGGG 
CTATTTGAGG GGAAAGAAGC TGCGGCTTTG ACAGATGATA CCGTTATGGA ATTATTTGAA
GAGCAGCTTT CTGCACAGAT TATTATGGTG TGTGGTCAGA ATCCATCGCT AACCTTTGCT
CAACGTAATC AAGTTATTCG TGAGATTGAC GCCATCGTCT ATGATCTCGA AGAGATCTTG
GCGAGCGTGG CAAACCGAAA AGCTACCCCC AAACAAACGT TATTTATCAC CGAATTTTCT
GGCCTGATTA AAAATCTGTT CGATCAGGAA ATTTCAAAAG TTCTTATCAC CGAGTAA
 
Protein sequence
MVTDKDGYMH LIQFLSEHLG LFEGKEAAAL TDDTVMELFE EQLSAQIIMV CGQNPSLTFA 
QRNQVIREID AIVYDLEEIL ASVANRKATP KQTLFITEFS GLIKNLFDQE ISKVLITE