Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2604 |
Symbol | |
ID | 5610365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3156805 |
End bp | 3157161 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640933523 |
Product | hypothetical protein |
Protein accession | YP_001474339 |
Protein GI | 157375739 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.510328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTACAG ATAAAGATGG GTATATGCAT CTCATTCAGT TCCTCTCAGA GCATTTAGGG CTATTTGAGG GGAAAGAAGC TGCGGCTTTG ACAGATGATA CCGTTATGGA ATTATTTGAA GAGCAGCTTT CTGCACAGAT TATTATGGTG TGTGGTCAGA ATCCATCGCT AACCTTTGCT CAACGTAATC AAGTTATTCG TGAGATTGAC GCCATCGTCT ATGATCTCGA AGAGATCTTG GCGAGCGTGG CAAACCGAAA AGCTACCCCC AAACAAACGT TATTTATCAC CGAATTTTCT GGCCTGATTA AAAATCTGTT CGATCAGGAA ATTTCAAAAG TTCTTATCAC CGAGTAA
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Protein sequence | MVTDKDGYMH LIQFLSEHLG LFEGKEAAAL TDDTVMELFE EQLSAQIIMV CGQNPSLTFA QRNQVIREID AIVYDLEEIL ASVANRKATP KQTLFITEFS GLIKNLFDQE ISKVLITE
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