| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2601 |
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| Symbol | |
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| ID | 5610707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3154872 |
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| End bp | 3155741 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933520 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474336 |
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| Protein GI | 157375736 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4067] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0114575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAA AAATTGGCTT TTGTATGTTA CTCGTTTCAA GTACCTGTTG GGCCGGAGAT
AAAGCAATTA TAGGTTCATC TGAGCTGATG TCGGTCGAAC AGACCGGATT AAGTTATGAG
GCCAGAATTG ATACGGGCGC GGTGAATACC TCTCTTCATG CCTTCGACCT GGAAATAGAA
GGTGGCAGTG AAAAGAAGAT GAAAGACAAT GTGGGGAAAA CCTTGTTTTT CACCACAGAG
AATGAAGAGG GCCTTCAGAA ACGTCTGAAA GCTAAGATTG TTAAAACCTC TACCGTGAGT
AACTCTCAGG GCAGGGAAAC ACGTTATATG GTTGACCTTA AGGTTGGTTT CCAGGACAAG
GAGAGAAAAG TCAGAGTCAA CCTGAGAGAT AGAAGCCATA TGGATTATAA GTTACTCATA
GGTCGAAATT GGCTTAAAGG TAAATACATA GTCGATGTGT CAGAAAAGAA AGTCATAGGG
CCTGTAGCGC CGATTAGTAT TCTGGAGTCG GGTCTGACTT TTGAAACCCG TATCGATACC
GGAGCCGTAG AGAACTCACT CCATGCCGTC GATCTCAAGG TGGAGAATGG TGAAAAGGAT
ATGGAGAAGA ATATAGGTAA ACGCTTGAGC TTCACCACCG AAAATGAAAA AGGGGAGTCT
CATCGGGTCA ATGCGATGAT CGTTGAAACC TCGTTGATCC GTAACGCTCA GGGGAGCGAG
ATACGGTATA TGGTCGAGTT GACCGTGGGT CAGCCTGGCC AAGAGTATAA AGTAAAGGTT
AACCTTAAAG ATCGTAGTAA GATGAGTTAT AAATTTCTTA TCGGTCGAAA TTGGTTACAG
GGCCATTATA TGGTCGATGT CTCGCTCTAG
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| Protein sequence | MLKKIGFCML LVSSTCWAGD KAIIGSSELM SVEQTGLSYE ARIDTGAVNT SLHAFDLEIE
GGSEKKMKDN VGKTLFFTTE NEEGLQKRLK AKIVKTSTVS NSQGRETRYM VDLKVGFQDK
ERKVRVNLRD RSHMDYKLLI GRNWLKGKYI VDVSEKKVIG PVAPISILES GLTFETRIDT
GAVENSLHAV DLKVENGEKD MEKNIGKRLS FTTENEKGES HRVNAMIVET SLIRNAQGSE
IRYMVELTVG QPGQEYKVKV NLKDRSKMSY KFLIGRNWLQ GHYMVDVSL
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