Gene Ssed_2598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2598 
SymbolpheS 
ID5613452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3148871 
End bp3149854 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content45% 
IMG OID640933517 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_001474333 
Protein GI157375733 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00149835 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGT TAACAGAGAT CGTAGAACAG GCCTTAGCTG CCATTGAAGG GACCGAAGAT 
TTAAAAGCCC TTGATGAGCT TCGTGTCGAT TACCTTGGAA AGAAAGGTAA AATTACCGAC
ATGATGAAGA TGATGGGGAA GCTAAGTCCG GCCGAAAAAC CGGCATTTGG CCAAGCTGTT
AATCAGGCGA AACAAGCAGT ACAAAAGCAG CTGTCTGAGC GAATAGACAA TCTGAAGGCA
AAAGAGCTTG AAGCACAACT TGTAGCAGAA AGCATCGATG TCTCACTACC GGGTCGTCGT
ATCGACAACG GTGGTCTGCA TCCTGTGACT CGCACTATCG AAAGAATAGA AACTTTCTTT
GGTGAGCTTG GCTTTAGTGT CAAGGAAGGT CCGGAAATCG AAGATGACTT CCACAATTTC
GATGCCTTGA ATATTTCTGA GCACCATCCA GCTCGTGCCG ACCATGATAC GTTCTACTTT
AATCCAAAGG TAATGTTGCG TACTCAAACT TCCGGTGTAC AGATCCGTAC CATGGAAAAT
GAGAAGCCAC CTCTGCGTAT TATCTCTCCA GGTCGCGTAT ACCGTAACGA TTACGATCAG
ACTCACACGC CTATGTTCCA TCAGGTTGAG GGTTTGTTGG TTGCTGAGAA CGTCAACTTT
GCCGAGCTTA AAGGCATACT GCACGACTTC TTACGTAACT TCTTTGAGGA AGACTTAGAA
GTCCGTTTCC GTCCTTCATA CTTCCCCTTT ACAGAGCCTT CGGCTGAAGT TGATGTTATG
GGTAAAAACG GTAAATGGCT TGAAGTGCTT GGCTGCGGCA TGGTGCATCC AAATGTACTG
CGTAGTGTTG GCATCGATCC TGAGAAATAC TCTGGTTTTG CTTTTGGTAT GGGTGTTGAG
CGTCTGTCGA TGTTGCGTTA CGGCGTTAAC GATCTACGTT CTTTCTTTGA AAATGACCTA
CGTTTCCTCA AGCAATTTAA ATAA
 
Protein sequence
MSQLTEIVEQ ALAAIEGTED LKALDELRVD YLGKKGKITD MMKMMGKLSP AEKPAFGQAV 
NQAKQAVQKQ LSERIDNLKA KELEAQLVAE SIDVSLPGRR IDNGGLHPVT RTIERIETFF
GELGFSVKEG PEIEDDFHNF DALNISEHHP ARADHDTFYF NPKVMLRTQT SGVQIRTMEN
EKPPLRIISP GRVYRNDYDQ THTPMFHQVE GLLVAENVNF AELKGILHDF LRNFFEEDLE
VRFRPSYFPF TEPSAEVDVM GKNGKWLEVL GCGMVHPNVL RSVGIDPEKY SGFAFGMGVE
RLSMLRYGVN DLRSFFENDL RFLKQFK