| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2595 |
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| Symbol | |
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| ID | 5613449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3144996 |
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| End bp | 3145931 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640933514 |
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| Product | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
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| Protein accession | YP_001474330 |
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| Protein GI | 157375730 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | [TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.851194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCAAGAA AGCCTAAGTA TTTTGATCGT AGGTTCAAAG CTGAACTACT TCATCCCAAA
TATTGGTCAA CCTGGTTTGG GATCCTGATA TTAGTTATCT TTGGTTTGAT GCCGGCCTGG
CTTCGCGACC CATTGGCCCG TTTACTCGCT AAACTGGTGA TGACGATTGC AAAGAAACCC
ATATCGATTG CTCGAATCAA TGTCACAGCC TGCTTCCCTG ATAAAACACC CACTGAGATA
GAAGCATTAC TCAAAGATAA TATTGAAAAC TTTGTCATGA TCCTGCTGGC TCAATCTGAG
CTGCTGGTAC GCTCTAACGC TAACCTGCGT CGCAGGGTCA AGTTGGTGGG GTTTGAGCAT
GTTGAGAGTG CACGAGCGGC CGGTCAACCG GTGATATTTA TCATGCCTCA TGTATGGGGC
ATCGAATATG CGGGCCTTAG GCTCAACCTC GACCTGCCTA TGGTGAGCAT GGCCAAGGCG
CATCGTAATG GCCTGTTTGA CTGGTTTAAC AACCGTATGC GTAGCAGCCT TGGTGGCAAC
ATCTATATGC GCGAGGCGGG GATCCGGGCA CTCTTGTCTG AGCTTAAAAA CAATAACAGC
TTCTTCTATC TTCCCGATGA AGATTTAGGG CCGGATAAAA GCGTCTTTGC CCCTTTCTTG
GGCACGGTTA AGGCGACACT GCCCGTTGTC GGGCGTCTGG CCCAGGCCGG TAATGCTCAG
GTGATGCCGG TAAAAATCGG CTATAACCAG CAGACTCGTC AATTTGAGTT AACGGTCATG
CCAGCCATCG AGCCCGATGA GATGAAGGGT AAAGAGAACG AAGCGATTGC CCTGAACAAG
GCCGTTGAGC AGGTGATCTT AGCTTATCCT GAGCAGTATA TGTGGTTCCT GAAGGTGTTG
AAGACACGCC CCGAGGGTGA AGCGCCACTG TATTGA
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| Protein sequence | MSRKPKYFDR RFKAELLHPK YWSTWFGILI LVIFGLMPAW LRDPLARLLA KLVMTIAKKP
ISIARINVTA CFPDKTPTEI EALLKDNIEN FVMILLAQSE LLVRSNANLR RRVKLVGFEH
VESARAAGQP VIFIMPHVWG IEYAGLRLNL DLPMVSMAKA HRNGLFDWFN NRMRSSLGGN
IYMREAGIRA LLSELKNNNS FFYLPDEDLG PDKSVFAPFL GTVKATLPVV GRLAQAGNAQ
VMPVKIGYNQ QTRQFELTVM PAIEPDEMKG KENEAIALNK AVEQVILAYP EQYMWFLKVL
KTRPEGEAPL Y
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