Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2587 |
Symbol | |
ID | 5610866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 3135894 |
End bp | 3136127 |
Gene Length | 234 bp |
Protein Length | 77 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640933506 |
Product | hypothetical protein |
Protein accession | YP_001474322 |
Protein GI | 157375722 |
COG category | [S] Function unknown |
COG ID | [COG2320] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGTTG ATGGTACTAA AGCCGATAAG AATCAAGATA CAAAAATAGT GAGGGAATAC GGCACTCATA TCAATGCGCT TGGTATCAAT GCCGTTAAGA TCGAGCATAT TGGCAGTACA GCTGTCATTG GATTAACAGC TAAGCCTGTT GTTGATATTC TAATTGAGGT TAGCAACCTT AAGGAATTCA ATACTGCAAA TGAAAAACTA GTTCTCCAGT GGTTTGGCAA CTAG
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Protein sequence | MGVDGTKADK NQDTKIVREY GTHINALGIN AVKIEHIGST AVIGLTAKPV VDILIEVSNL KEFNTANEKL VLQWFGN
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