| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2548 |
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| Symbol | |
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| ID | 5609812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3092975 |
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| End bp | 3093604 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640933467 |
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| Product | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein |
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| Protein accession | YP_001474283 |
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| Protein GI | 157375683 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0139] Phosphoribosyl-AMP cyclohydrolase
[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
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| TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGTGA CCGCAGAACA ATTATCAAGC CAGCTCGACT GGGAAAAACA AGCGGGACTC
ATTCCAGCCG TGGTACAAAA CCACCTCACG GGGAAAGTCC TTATGCTGGG CTACATGGAC
AGGGCCGCCC TGGCCAAAAC CATAGAGACG AAAAGCGTCA CCTTCTTCAG CCGCAGCAAG
GAGCGGTTGT GGACTAAAGG GGAAACCTCC GGCAACACCC TCGAGCTTAT CGCCATCGAT
AAAGATTGTG ACAACGACAG CCTCTTGGTA CAGGTTATAC CCAATGGCCC TACCTGCCAC
CTGCAGACCG AAAGTTGCTG GCCGGACGGT AACGCCCATA CCTTTATCGA TAACCTGTCA
CACTTAATCG CATCACGTAA AGGTGAAGAT CCTGAGTCTA GTTACACCGC TTACCTGTTT
GAACGCGGTA CTAAGCGTAT CGCTCAAAAA GTCGGTGAAG AGGGGCTGGA AACGGCCTTG
GCCGCGGCGA CCAATGATAA ACCTGAATTG ATAGATGAAG CGTCCGATCT TATCTATCAC
CTATTGGTAC TGCTCGAAGA TCAGGATCTG GAGTTGGCAG ACATCACCAG AAACCTACTC
AAACGTCATA ACAAGGCGAG CCAGAGCTAA
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| Protein sequence | MTVTAEQLSS QLDWEKQAGL IPAVVQNHLT GKVLMLGYMD RAALAKTIET KSVTFFSRSK
ERLWTKGETS GNTLELIAID KDCDNDSLLV QVIPNGPTCH LQTESCWPDG NAHTFIDNLS
HLIASRKGED PESSYTAYLF ERGTKRIAQK VGEEGLETAL AAATNDKPEL IDEASDLIYH
LLVLLEDQDL ELADITRNLL KRHNKASQS
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