| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2543 |
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| Symbol | |
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| ID | 5609850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3088453 |
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| End bp | 3089523 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640933462 |
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| Product | histidinol-phosphate aminotransferase |
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| Protein accession | YP_001474278 |
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| Protein GI | 157375678 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.562111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATAA ATACTTCCAG CCAATTAAAT CCAGCTCAAT TAAATCTGGC ACAGCGGTTA
GCCAGACCTG AGCTGCTCGA ACTTCAGCCC TACCAGTCGG CAAGACGGAT CGGTGGGCGC
GGCGATATCT GGATCAATGC CAACGAGTCG CCGTTTAATA ACAGTCAACT CGATAAACTC
AACCGTTACC CCGAGTGCCA GCCACCCGAG CTTATCTCGG CCTACAGCCA ATATTCCGGG
GTCGCTAGAG ACTGCATCAT CACAGGGCGC GGCGCCGATG AGGCAATAGA GCTGCTCATT
CGCACCTTTT GTGTCCCGGG CATCGATTCC ATCGCCTGCT TTGGTCCTAC CTATGGCATG
TATGCCATCA GCGCCAAGAC CTTTAATGTC GGCGTCAATG CATTGAGCCT GACCGATAAC
TACCAGCTTC CCACAGAGAT AGTGGCTCAG GTCAATGATG CCAAGTTGGT ATTTATCTGT
AACCCAAATA ACCCCACAGG CACAGTGATC GACAGGGCCA GCATCGAAAC TGTGATTGCC
AGCCTGCCGG AACGATTGGT TATCGTCGAT GAGGCTTATA TCGAGTTTTG TCCCGATTTT
TCCGTCGCCG ATCTTGTTGA AAAATATGAT AACTTAGTCG TACTTCGCAC TCTGTCTAAG
GCTTTTGCTC TCGCCGGTGC TCGCTGCGGC TTTATGCTGG CTAACCCGCA GATCTGTGAG
ATGGTCATGC GCGTTATCGC TCCTTACCCG GTTCCCCTGC CGGTATCTGA ACTGGCGTGC
GCGGCGCTTA GCGATGACGG GATCAAGGTC ATGCGTGAAC AGGTCGCCAA TATGAAGGCC
AATGGCGCCC GCTTAAGCGA TGCCTTGCGT GATTTCGGGG CTAAGGTGTT ACCGGCAAAC
GGCAACTTTG TGCTGGCCCA GTTTGATGAA CCGCAAGCCG TCACGGCCAA GCTGACTCAG
GGTGGCGTCG TAGCCAGAAC CTATTCAGAT CCACGACTGG CAGGCAGCAT TCGTTTCAGC
TTTAGCAACA ATGAAGAGAC CGACTATCTC ATCGAACAAT TGTCTAACTA A
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| Protein sequence | MTINTSSQLN PAQLNLAQRL ARPELLELQP YQSARRIGGR GDIWINANES PFNNSQLDKL
NRYPECQPPE LISAYSQYSG VARDCIITGR GADEAIELLI RTFCVPGIDS IACFGPTYGM
YAISAKTFNV GVNALSLTDN YQLPTEIVAQ VNDAKLVFIC NPNNPTGTVI DRASIETVIA
SLPERLVIVD EAYIEFCPDF SVADLVEKYD NLVVLRTLSK AFALAGARCG FMLANPQICE
MVMRVIAPYP VPLPVSELAC AALSDDGIKV MREQVANMKA NGARLSDALR DFGAKVLPAN
GNFVLAQFDE PQAVTAKLTQ GGVVARTYSD PRLAGSIRFS FSNNEETDYL IEQLSN
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