| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2537 |
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| Symbol | |
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| ID | 5609585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3082741 |
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| End bp | 3084015 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933456 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474272 |
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| Protein GI | 157375672 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3681] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.518333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATC AATGGCAGCA ATACCAGGCA ATTCTTAATG CCGTCGTCAA GCCTGCATTA
GGTTGTACCG AGCCTATTTG TGCGGCCTAC GCTTCGGCGA TCGCGGCGTC TATGTTGACA
TCAGAGCCAG AGAGCGTCTC TGTTCATGTT TCCGATAACC TGTACAAAAA TTCCATGGGC
GTTTTTGTTC CGGGCACAGG GAAAATAGGA CTCGCCATTG CCGCAGCTGT TGGTGCTATT
GGTGGCAATG CCGAAGCGGG GCTGGAAGTA CTGGCAACGA TAGAGGCGGA TCAGGTAGAG
CGGGCGCAGG CTATGATAGA TGCTGGCAAT GTCTCGGTGA GCCGGACTCA AACAGATGAA
TTTATTTACT GTTATGTTAA GGCTCACAGT GGCGATGATG TCGTTACTGT TGAGATCTCT
GGCGGCCATA CGCAAGTGGT CGAAAAAACG CTCAATGGTG AGATAGTGTT TGCCAAAGAG
GTTAGCGCTA CTACATCGAC GGCGGGAATT TGTGATGGTG TCGATATCAG CATTGCAGGA
ATTTATGACT ATGCCACCCA AGTTAGCTTT GAAGATATTA GATTTATCCT CGATGCATCA
GAGCTTAATA CTAAGTTATC TGCCGAAGGG CTAGCCAATG AGTATGGCTT ACAAGTGGGA
AGAACCATAG ATAAAAGCAT TAAGGATGGT TTTATGTCTT CGGATTTTGC CAATAATATT
CTTATGCATA CTGCGGCAGC ATCCGATGCC AGAATGGGAG GAGCAAGCCT TCCAGCCATG
AGTAATTATG GCAGTGGTAA TCAAGGGATC GCGGCTACAT TGCCCGTAGT CATGACGGCA
ACACATTATC AAGCTAATGA TGAGCTGCTC GCAAGGGCAC TGATCATGAG CCATCTTGGC
GCTATCTATA TTAAGTCTCA TTACCCACCT TTGTCGGCAT TTTGCGGTAA TACGGTGACA
AGTGCTGCGG CGGCAATGGC CATGGTATAC CTGGCTGGTG GCAGTTATCA GCAGTCATGC
TTTGCAATTC AAAATGTCAT GAGTGATTGC TCTGGCATGG TGTGTGACGG GGCTAAGTCA
ACTTGTGCAA TGAAGGTGAA GACCTCAACA GGAAGCGCGG TTAATGCATT TATGTTGGCT
ATCCAGAGCA CCGCTGCTCA AGCTCAGGGA ATTGTAGCCG ATGATGTGGA GCACACAATT
CGCAATATTG GTCAGCTGGT TACCTTAGGT ATGGGTAACA CAGACACCAC AATCATTGAT
ATAATGTCGG CTTGA
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| Protein sequence | MKHQWQQYQA ILNAVVKPAL GCTEPICAAY ASAIAASMLT SEPESVSVHV SDNLYKNSMG
VFVPGTGKIG LAIAAAVGAI GGNAEAGLEV LATIEADQVE RAQAMIDAGN VSVSRTQTDE
FIYCYVKAHS GDDVVTVEIS GGHTQVVEKT LNGEIVFAKE VSATTSTAGI CDGVDISIAG
IYDYATQVSF EDIRFILDAS ELNTKLSAEG LANEYGLQVG RTIDKSIKDG FMSSDFANNI
LMHTAAASDA RMGGASLPAM SNYGSGNQGI AATLPVVMTA THYQANDELL ARALIMSHLG
AIYIKSHYPP LSAFCGNTVT SAAAAMAMVY LAGGSYQQSC FAIQNVMSDC SGMVCDGAKS
TCAMKVKTST GSAVNAFMLA IQSTAAQAQG IVADDVEHTI RNIGQLVTLG MGNTDTTIID
IMSA
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