Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2536 |
Symbol | |
ID | 5609584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3082036 |
End bp | 3082683 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640933455 |
Product | MukF protein |
Protein accession | YP_001474271 |
Protein GI | 157375671 |
COG category | [S] Function unknown |
COG ID | [COG2964] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGACAAT TAACGATAAA CGATCATGCC ATATTGAAAG CTTGTGAAAA CATTATCGAT GGCATTGCCG CCATGTATGG TGAGCATACC GAGGTCTTGC TACATAGTCT GGATGCAAGC AACCCATCTA TCACTAAGAT AGCCAATGGT CATATTACGG GGCGCTCTGT AGGAGCGCCT ATTACTAACC TTGCGTTGAT GAAGCTAAAT GAAGGGCAAG ATGTCTCGGA CTCCTATATG ACCCAGAGTC CGGATGGTAA AACATTAAGG TCTATCACCA TAGTGATCCG TAATTCAGAG CAAGATGCTA TCGGTTTATT GTGTATCAAC TCAAATCTCG ACGCGCCGTT TCAGTCTGTT ATGCGTACTT TGCTACCGGG CCTTGCACCC CAAGTCGATT CTGGCTTTAC TCCTGAAACC TTCGCCAGAA GCAATGATGA GATGATGCAG AGTTCAATCG AGGGCGTGCG CACTCAGGTG ATGGCTGACG ATACCCTCTC ACCATCGAAG AAAAACCGAG AGATAGTTAT CCGGCTCAAT GAGTTGGGCA TTTTCGATCT TAAAGACAGT GCTCAGATAG CGGCCAAGGG CTTAGATATC TCAATACACA CCATCTATCG CTATCTGCGT GAGTTGAAGA CTGCATAG
|
Protein sequence | MRQLTINDHA ILKACENIID GIAAMYGEHT EVLLHSLDAS NPSITKIANG HITGRSVGAP ITNLALMKLN EGQDVSDSYM TQSPDGKTLR SITIVIRNSE QDAIGLLCIN SNLDAPFQSV MRTLLPGLAP QVDSGFTPET FARSNDEMMQ SSIEGVRTQV MADDTLSPSK KNREIVIRLN ELGIFDLKDS AQIAAKGLDI SIHTIYRYLR ELKTA
|
| |