Gene Ssed_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2536 
Symbol 
ID5609584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3082036 
End bp3082683 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content46% 
IMG OID640933455 
ProductMukF protein 
Protein accessionYP_001474271 
Protein GI157375671 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACAAT TAACGATAAA CGATCATGCC ATATTGAAAG CTTGTGAAAA CATTATCGAT 
GGCATTGCCG CCATGTATGG TGAGCATACC GAGGTCTTGC TACATAGTCT GGATGCAAGC
AACCCATCTA TCACTAAGAT AGCCAATGGT CATATTACGG GGCGCTCTGT AGGAGCGCCT
ATTACTAACC TTGCGTTGAT GAAGCTAAAT GAAGGGCAAG ATGTCTCGGA CTCCTATATG
ACCCAGAGTC CGGATGGTAA AACATTAAGG TCTATCACCA TAGTGATCCG TAATTCAGAG
CAAGATGCTA TCGGTTTATT GTGTATCAAC TCAAATCTCG ACGCGCCGTT TCAGTCTGTT
ATGCGTACTT TGCTACCGGG CCTTGCACCC CAAGTCGATT CTGGCTTTAC TCCTGAAACC
TTCGCCAGAA GCAATGATGA GATGATGCAG AGTTCAATCG AGGGCGTGCG CACTCAGGTG
ATGGCTGACG ATACCCTCTC ACCATCGAAG AAAAACCGAG AGATAGTTAT CCGGCTCAAT
GAGTTGGGCA TTTTCGATCT TAAAGACAGT GCTCAGATAG CGGCCAAGGG CTTAGATATC
TCAATACACA CCATCTATCG CTATCTGCGT GAGTTGAAGA CTGCATAG
 
Protein sequence
MRQLTINDHA ILKACENIID GIAAMYGEHT EVLLHSLDAS NPSITKIANG HITGRSVGAP 
ITNLALMKLN EGQDVSDSYM TQSPDGKTLR SITIVIRNSE QDAIGLLCIN SNLDAPFQSV
MRTLLPGLAP QVDSGFTPET FARSNDEMMQ SSIEGVRTQV MADDTLSPSK KNREIVIRLN
ELGIFDLKDS AQIAAKGLDI SIHTIYRYLR ELKTA