| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2530 |
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| Symbol | |
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| ID | 5609859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3073502 |
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| End bp | 3074668 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640933449 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001474265 |
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| Protein GI | 157375665 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.840072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.636484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTAT TTGCAAATTG GCACTACCCG ACGGCTATTA CCGTTGGCGA TACCTGTATC
TCACTGATAG GGGAGAAGTG CCTTAACTTA TCGATGAGCA GAGTGATGGT GGTGACCGAC
CCCGGTCTGG CAGAGCTGGC ATTGGTGACA GAGGTATTGT CCCATTGCAG AGAGGCGGGG
CTAGTCACAG AGCTGTTTTG CGATATACAG GCTAACCCTA CAGGCGAAAA TATCAGACAA
GGGATCGAGG CGTTTAATGC CGGTGAATTC GACGGTATTA TTGCTTTGGG AGGTGGTTCA
AGTATCGATG CGGGGAAGGC GATAGCCTTG ATGGCTAAAC AAACAATCTC TCTGTGGCAG
GCGGAAGACG TAGATGATAA CTGGAAGCGA GTCGATGTGG ATAATATGGT GCCAGTGGTT
GCCGTGCCGA CCACAGCCGG TACCGGGGCC GAAGTCGGCC GGGCGTCGGT GATCACAGAT
ACCGATGGTG AATATCATGT TAAGCGCATC ATTTTCCATC CTAAGATGAT CCCTGCCACT
GTCTTACTCG ATCCCGGCCT AACGGTGAAG TTGACGCCGC AGATGACCGC GGCGACCGGG
CTGGACGCGC TATCTCACAA TCTTGAGGCA TTTTGTGCAC CTTTTTATCA TCCCATGGCC
GAAGGGATTG CTATCGAAGC CATGAGATTG ATTAAAGCCT ACTTGCCTGT TGCGTTCGAA
GATGGTGAAA ACATCGAGGC GCGAACACAG ATGCTGGTGG CGTCCAGCAT GGGGGCAACC
AGCTTTCAGC GGGGACTCGG CGGCATGCAT GCGCTGGCAC ATTCCCTGGG GGCACTCTAT
AACACACATC ACGGCCTGCT TAACGCGATA TTGATGCCCT ATGTATTAAA GAGAAATCGA
GGTGAGATAG AGGAGAGGAT CACCCGTCTG GCCAGATACC TTGAACTCGA CTACCCGGGA
TTTGACAGCT TTCTTGAATG GGTATTACTG TTCCGGGCCA GGCTGGATAT CCCCCACTCA
CTCGATGAGA TCGGTATCAC GCTCGAAGAT GTCCGCTTAG TCGGAGAGAT GTCAGTAAAA
GATGCGGCCG CGGGGGGGAA CCCGGTGTGC TTAACGGCCG ATGAATACTC CGAACTCTTT
AGTGATGCCG TTCAGGGACG TTTGTGA
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| Protein sequence | MELFANWHYP TAITVGDTCI SLIGEKCLNL SMSRVMVVTD PGLAELALVT EVLSHCREAG
LVTELFCDIQ ANPTGENIRQ GIEAFNAGEF DGIIALGGGS SIDAGKAIAL MAKQTISLWQ
AEDVDDNWKR VDVDNMVPVV AVPTTAGTGA EVGRASVITD TDGEYHVKRI IFHPKMIPAT
VLLDPGLTVK LTPQMTAATG LDALSHNLEA FCAPFYHPMA EGIAIEAMRL IKAYLPVAFE
DGENIEARTQ MLVASSMGAT SFQRGLGGMH ALAHSLGALY NTHHGLLNAI LMPYVLKRNR
GEIEERITRL ARYLELDYPG FDSFLEWVLL FRARLDIPHS LDEIGITLED VRLVGEMSVK
DAAAGGNPVC LTADEYSELF SDAVQGRL
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