| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2525 |
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| Symbol | |
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| ID | 5609993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3069707 |
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| End bp | 3070537 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933444 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474260 |
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| Protein GI | 157375660 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4798] Predicted methyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.637158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACAA AGACTCTGGC ATTAGGTTTC TTCGTAACGG CTGGTCTAAC TTTTAGTGCC
GTGGCTCATG AATACAGCGA TGATACTCAA AGCCTGACTA ATGTGGTTAA CAGCGAGTTC
AGACAAGCTA AAAATGTTGA ACGAGATGGA TTTCGTCACC CGTTAGAGAC GCTGTCATTT
TTTGATATAA AAGCATCAGA TACAGTGGTC GAACTATGGC CGGGAGGTGG TTGGTACGCC
GAAATCTTGG CTCCTTATCT GGCGCACCGC GGCAACTATA TCGCAGGTAA TTTCGATACT
AATCCCGATG ATGAGAAACA GCGCAATGGT TACCGGGCTA AGGCCGGGAA AAAGTTTGAG
CGCTGGTTAG CCGATAACAG GGAACATCTG GGGAACGCCA CGACGGTGAC CTTCGATCCA
CCCGGTTATT ATCAACTCGG TAATGATAAC AGCGTCGATG TCGTGCTGAC CTTCAGAAAC
CTGCACAATT GGGCGATGAA AGGTTACCTG GAGCCTGTGT TTGTATCCGC TTATAAAGTA
CTTAAGTATG GTGGTACCTT TGGGGTGGTT GAGCATAGAG CAAATCCGGG AATGGATGCT
AAAACCGGTT ATATGGATCA GACACAAGTG ATCGCCTTAG CCGAAAAGGT GGGGTTTACC
TTGGTTGAAC AATCGGAGGT AAATGCCAAC CCCAAAGATA CCAAGAACTA CCCTAAAGGT
GTGTGGACAC TGCCGCCGCG ACTGGCGTTG GACTCTCTTG ATAGAGATAA GTATCTCGCT
ATTGGTGAGA GTGATCGCAT GACACTAAAA TTTATTAAAA ATAGTCAATA A
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| Protein sequence | MDTKTLALGF FVTAGLTFSA VAHEYSDDTQ SLTNVVNSEF RQAKNVERDG FRHPLETLSF
FDIKASDTVV ELWPGGGWYA EILAPYLAHR GNYIAGNFDT NPDDEKQRNG YRAKAGKKFE
RWLADNREHL GNATTVTFDP PGYYQLGNDN SVDVVLTFRN LHNWAMKGYL EPVFVSAYKV
LKYGGTFGVV EHRANPGMDA KTGYMDQTQV IALAEKVGFT LVEQSEVNAN PKDTKNYPKG
VWTLPPRLAL DSLDRDKYLA IGESDRMTLK FIKNSQ
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