| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2479 |
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| Symbol | |
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| ID | 5610478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3014191 |
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| End bp | 3015555 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933400 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474216 |
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| Protein GI | 157375616 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00147057 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0236321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAAC TTGGGATATT GTCGGCGTCT GTGATGCTAG CACTCAGTGC GCCAGCCGCA
TTGGCTAAAG TTACAGATGC TGAAGCTGCA AAGCTTGGAA CCGAATTAAC GCCATTAGGT
GGTGTTAAAG CCGGTAATGC CGATGGTTCG ATTCCTGCCT GGGATGGTGG GATCACTTCC
GCCATTGCAG GTTATGAGAA GGGGATGCAT CATCCGGATC CTTTTCCTCA GGACAAGATT
GAATTTACGA TAACTAATGC CAATAAAGAT AAATACAAGG CTCATCTGAC CGATGGCCAG
AGGAAGTTAT TTGAACTTTA CCCTGACACC TACAAGATGA ATGTCTATCA GACCAGGCGT
ACCGCTTCTG TGCCTCAGTT TGTCTATGAT GCGACTAAAG CCAATGCGAC CCGCGCCGAA
CTTGTATCTG AAGGTAACGG CGTTAAAGGT GCATCGATTG GTGTGCCATT CCCTATGCCT
AAAAATGGTT TAGAGGTTAT CTGGAACCAT GTACTGCGTT TTCGTGGGGT GGATGTAGAA
ACTTCCCGTA GCCAAGCCGC GCCGACGGCG AGTGGTAGCT ATACCTTAGT TGAAACCGCC
GAGGAGATAC GTTTTCAGTA TTCTCGTCCG GAGATCACCT TAGATAAACT CAATGCGTCA
AATACCTTGT TCTACTTTAA GCAGGTCGTG ACACAACCGG CGCGTCTTGC GGGTACTGCA
CTACTGGTTA AAGAGACCAT GGATCAAGAG GCATTACCTC GCCAGGCGTG GACCTACAAT
ACAGGTCAAC GCCGTGTTCG TAAGGCCCCT AATGTGGCCT TCGATACACC GGGTTCTGTA
TCTGACGGTC TTAGAACGAC GGATGACTTT GACATGTTTA ACGGCTCTCC TGTTCGTTAT
AACTGGGAGT TGATCGGTAA GCAGGAAGTC TACATTCCCT ATAATGATTA CAAGCTACAT
TCGGATAAGC TTAAGTATGA CCAGATTATT CATCCCGGTC ATGTGAATCC TGAGCTTGTG
CGTTGGGAAA AGCACCGTGT TTGGGTTGTC AAAGCTCAGC TTAAAGAGGG CATGCGTCAT
ATTTATAAGA CGCGTACTTT CTATATAGAT GAGGACTCCT GGCAGGTGTC GCTAGCCGAT
ATCTATGATA ATCGTGATGA GTTATATCGT GTTGCCTTTG CGCATGCTAT TAACTATTAC
GAAGTTCCTA CACATTGGAC TACGCTTGAG GTCTTCCATG ATCTTCAATC CCGTCGTTAT
ATCGCAATGG GACTCGATAA CGAAGGCCGT ATGTATAATT TTGATGCCAA GCTGAGTGAA
GCTAACTTCA CCCCCGCGGC GTTAAGACGT GCCGGTATTC GTTAA
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| Protein sequence | MNKLGILSAS VMLALSAPAA LAKVTDAEAA KLGTELTPLG GVKAGNADGS IPAWDGGITS
AIAGYEKGMH HPDPFPQDKI EFTITNANKD KYKAHLTDGQ RKLFELYPDT YKMNVYQTRR
TASVPQFVYD ATKANATRAE LVSEGNGVKG ASIGVPFPMP KNGLEVIWNH VLRFRGVDVE
TSRSQAAPTA SGSYTLVETA EEIRFQYSRP EITLDKLNAS NTLFYFKQVV TQPARLAGTA
LLVKETMDQE ALPRQAWTYN TGQRRVRKAP NVAFDTPGSV SDGLRTTDDF DMFNGSPVRY
NWELIGKQEV YIPYNDYKLH SDKLKYDQII HPGHVNPELV RWEKHRVWVV KAQLKEGMRH
IYKTRTFYID EDSWQVSLAD IYDNRDELYR VAFAHAINYY EVPTHWTTLE VFHDLQSRRY
IAMGLDNEGR MYNFDAKLSE ANFTPAALRR AGIR
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