Gene Ssed_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2472 
Symbol 
ID5610078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3000095 
End bp3000334 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content38% 
IMG OID640933388 
Productglutaredoxin 2 
Protein accessionYP_001474209 
Protein GI157375609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.985648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.014983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGTA AGCCATTTCA GTATATCTTG TTTCACACAG ATGCCTGTCA TCTGTGTGAA 
CTTGCAGCTC AGTTACTCGA TGAAATTCAG ATTGAGTATG AGATGCATGA TATTTGCGAT
GATGATCTTC TTGCCGAACA ATATGGCATT CGAATACCTG TATTAAAATG CACGGATACT
GATAAAGAGT TAAATTGGCC ATTTGATATG GGCAGTTTGC AAGAATTTTT AGGAGCGTAA
 
Protein sequence
MPSKPFQYIL FHTDACHLCE LAAQLLDEIQ IEYEMHDICD DDLLAEQYGI RIPVLKCTDT 
DKELNWPFDM GSLQEFLGA