| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2453 |
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| Symbol | |
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| ID | 5612661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2978204 |
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| End bp | 2978761 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933367 |
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| Product | glutamate-1-semialdehyde 2,1-aminomutase |
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| Protein accession | YP_001474190 |
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| Protein GI | 157375590 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
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| TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0266359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.431169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGTTTA ATATACCTAT AGCGTTAACT CTTTTCAGGT TGTTTTTACT GCCTGTTTTC
GTGGTTATTT TTTATTTACC ATACTCATGG GCTCCCTTTG TTGCTGCCTT CGTCTTCTGG
TTAGCCGCAG TTACCGATGC ACTCGATGGT TATGCTGCCA GGAAGCTAAA GCAATCTACA
CGCTTTGGTG CCTTCTTAGA CCCGGTTGCT GATAAGATAA TGGTAACAAC AGCACTCGTA
TTACTTGTAG CCGAGTATAA TAGTGTGTGG TTGACACTAC CGGCGCTCTT TATGATTGGT
AGAGAAATTG TTATTTCAGC ATTGAGAGAA TGGATGGCTG AAATAGGTAA GAGGGGCGCT
GTGGCCGTTT CTTGGATTGG CAAGTATAAG ACAGCAGCCC AGATGATTGC GATCATTGGT
TTGATTTGGA AACCGAATGA CTTTCTAACT TACGCCGCTT ATGGTTTGTT CTACGTCGCA
ACCGTGCTGA CTTTCTGGTC TATGATGAGT TACATTCTTG CCGCCTGGGG CGATCTTACT
GCTGAATCGG ATAATTAA
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| Protein sequence | MPFNIPIALT LFRLFLLPVF VVIFYLPYSW APFVAAFVFW LAAVTDALDG YAARKLKQST
RFGAFLDPVA DKIMVTTALV LLVAEYNSVW LTLPALFMIG REIVISALRE WMAEIGKRGA
VAVSWIGKYK TAAQMIAIIG LIWKPNDFLT YAAYGLFYVA TVLTFWSMMS YILAAWGDLT
AESDN
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