| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2446 |
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| Symbol | |
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| ID | 5613783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2968636 |
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| End bp | 2970570 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933357 |
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| Product | putative serine protein kinase, PrkA |
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| Protein accession | YP_001474183 |
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| Protein GI | 157375583 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2766] Putative Ser protein kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0901471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATAT TTGAGCATTA CCAACAGCGC TACGAAAAAA AGCTCGATGA GGAATATTCA
TTACAGGATT TTTTGGAGAT CTGTAAGAAG GACCGTTCAG CATATGCATC GGCGGCCGAA
CGACTGCTAT TAGCAATCGG TGAACCTGAA GTCGTTGATA CATCGAAAGA TCCAATACTC
AGTCGAATTT TCTCTAATCG ATTAATTTCA CGATTCCCGG AATTTAAAGA CTTTTACGGT
ATGGAAGAGT CTATCGAACA GATAGTTGCC TACCTGAAAC ACTCGGCTCA AGGCTTGGAA
GAGTCGAAAC AGATCCTTTA CTTATTGGGT CCTGTCGGTG GCGGTAAATC ATCTCTCGCC
GAAAAATTAA AAGCACTGAT GCAAAAGATA CCCATCTATG TGTTAAGTGC CAATGGTGAT
AGAAGCCCGG TAAATGATCA CCCATTTTGC CTATTCAACC CTGAAGAGGA CAGTGGATTA
TTAGAGAGTG AATATAACAT TCCGTCTCGC TACCTCAAAT CTATCATGTC ACCATGGGCC
GTGAAGCGCC TGCACGATTA CGGCGGAGAC ATATCACAAT TTAAAGTAGT CAAAGTGTTT
CCCTCTATTT TGGATCAGAT GGCCATTGCG AAAACAGAAC CAGGAGATGA AAACAATCAG
GACATCTCAG CCTTGGTTGG TAAGGTTGAT ATCAGACAAC TGGAACATTT TGCTCAAAAT
GATGCAGATG CTTACTCATA CTCCGGCGCA TTATGCCGCG CAAATCAAGG CTTGATGGAG
TTCGTTGAGA TGTTTAAAGC ACCGATCAAG GTGCTTCACC CACTATTAAC AGCGACTCAA
GAAGGGAACT ATAACGGCAC CGAAGGCCTG TCGGCCCTCC CCTATAATGG TATTATTCTC
GCGCACTCTA ATGAATCTGA GTGGACAACA TTCAGAAATA ACAAAACAAA TGAAGCATTT
CTGGACAGGG TTTACATCGT AAAAGTGCCA TACTGCTTAA GAGTGTCTGA AGAGATCCAG
ATCTATAATA AGTTGTTAGC CAACTCAGAA CTCTCACAAG CACCTTGTGC TCCCGGAACG
CTGGAAACGC TCGCTCAGTT TAGTGTACTG TCACGTGTAA TAGCACCGGA AAATTCCTCA
ATCTTTTCAA AAATGCGTGT CTATGATGGT GAAAGTTTAA AAGACACAGA TCCTAAAGCA
AAATCCTATC AGGAATACCG CGATTACGCC GGGGTTGATG AGGGAATGCA TGGGCTATCG
ACCCGATTCG CCTTTAAGAT CTTATCTAAA GTCTTTAACT TCGACCATAG TGAAATTGCA
GCAAATCCGG TCCATCTTTT CTATGTATTG GAACGACAAA TTGAGCAGGA GCAATTCCCG
ACTGAACTTG CCGAGCGTTA TCTTGAGTCT CTGAAAGGCT ACTTAATACC AAAATACGTT
GAGTTTATAG GTAAAGAGAT ACAAACGGCC TATTTGGAGT CCTATTCAGA ATACGGTCAA
AATATTTTTG ACCGCTATGT CACCTACGCA GACTTCTGGA TTCAAGATCA AGAGTATCGA
GATCCTGAAA CGGGCCAATT GTTCGACCGC TCGGCACTCA ATGCAGAGCT CGAGAAAATT
GAAAAACCTG CAGGAATTAG TAATCCTAAA GACTTCAGAA ATGAGATTGT TAACTTTGTA
CTCAGGGCGC GTGCCAACAA TGAGGGCTCG AATCCATTAT GGACGAGTTA TGAAAAGCTT
CGAACTGTCA TCGAGAAGAA GATGTTCTCC AACACAGAAG ATCTTCTGCC CGTCATCTCA
TTTAATGCCA AAACATCTAC CGATGATCAG CGAAAGCATG ATGATTTTGT AAATCGTATG
ATGGAAAAAG GCTACACCAA AAAGCAAGTC AGATTGCTTT CAGAATGGTA TCTGAGAGTT
AGAAAGTCTT CTTAA
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| Protein sequence | MGIFEHYQQR YEKKLDEEYS LQDFLEICKK DRSAYASAAE RLLLAIGEPE VVDTSKDPIL
SRIFSNRLIS RFPEFKDFYG MEESIEQIVA YLKHSAQGLE ESKQILYLLG PVGGGKSSLA
EKLKALMQKI PIYVLSANGD RSPVNDHPFC LFNPEEDSGL LESEYNIPSR YLKSIMSPWA
VKRLHDYGGD ISQFKVVKVF PSILDQMAIA KTEPGDENNQ DISALVGKVD IRQLEHFAQN
DADAYSYSGA LCRANQGLME FVEMFKAPIK VLHPLLTATQ EGNYNGTEGL SALPYNGIIL
AHSNESEWTT FRNNKTNEAF LDRVYIVKVP YCLRVSEEIQ IYNKLLANSE LSQAPCAPGT
LETLAQFSVL SRVIAPENSS IFSKMRVYDG ESLKDTDPKA KSYQEYRDYA GVDEGMHGLS
TRFAFKILSK VFNFDHSEIA ANPVHLFYVL ERQIEQEQFP TELAERYLES LKGYLIPKYV
EFIGKEIQTA YLESYSEYGQ NIFDRYVTYA DFWIQDQEYR DPETGQLFDR SALNAELEKI
EKPAGISNPK DFRNEIVNFV LRARANNEGS NPLWTSYEKL RTVIEKKMFS NTEDLLPVIS
FNAKTSTDDQ RKHDDFVNRM MEKGYTKKQV RLLSEWYLRV RKSS
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