| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2444 |
|---|
| Symbol | |
|---|
| ID | 5613781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | - |
|---|
| Start bp | 2967099 |
|---|
| End bp | 2967446 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640933355 |
|---|
| Product | glutaredoxin-like protein |
|---|
| Protein accession | YP_001474181 |
|---|
| Protein GI | 157375581 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0278] Glutaredoxin-related protein |
|---|
| TIGRFAM ID | [TIGR00365] monothiol glutaredoxin, Grx4 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.72039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0565869 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACAA ACGAAACCGT AGCGAAAATC AAACAGCAGA TCGCAGAGAA TCCAATCATT
GTTTACATGA AAGGCTCTCC TAAGTTACCT AGCTGTGGCT TCTCATCTCA AGTTGCTCAA
ATTATGATTA ACTGTAATGC TCAATTTGCG TTTGTTGACA TTTTACAGAA TCCCGATATT
CGCTCAGAAC TGCCTAAATA CGCTAACTGG CCAACGTTCC CTCAACTTTG GGTTGAAGGT
GAGTTGATCG GTGGGTGTGA TATTCTTACT GAGATGTATC AAAAAGGTGA GCTTCAAACA
TTGATCACCG AAACTGCCGC AAAATACCCG TCAGAAGAGC AAGCGTAA
|
|---|
| Protein sequence | METNETVAKI KQQIAENPII VYMKGSPKLP SCGFSSQVAQ IMINCNAQFA FVDILQNPDI
RSELPKYANW PTFPQLWVEG ELIGGCDILT EMYQKGELQT LITETAAKYP SEEQA
|
|---|
| |