| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2443 |
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| Symbol | |
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| ID | 5609912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2965737 |
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| End bp | 2966963 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933354 |
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| Product | uracil-xanthine permease |
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| Protein accession | YP_001474180 |
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| Protein GI | 157375580 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2233] Xanthine/uracil permeases |
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| TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.161391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0740726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA TTGCACTTGC CCTTCAAGGG GCGCAAATGC TGTTTGTCGC TTTTGGTGCA
TTGGTCTTAA TGCCTCTACT CACAGGCCTG GATACCAATG TTGCTTTATT CACCGCAGGT
ATTGGAACCC TGTTATTTCA ATTAATAACA AAACGCCAAA TACCGATATT CCTGGCTTCA
TCTTTCGCCT TTATCGCCCC AATAATGTAT GGCGTTCAAA CGTGGGGGCT CCCCTCCACC
ATGGGCGGGC TGATGGCAGC GGGGGCGGTG TATTTAATGT TAGCCAGTTT GATAAAACTA
AGAGGCGATA ATTTTATTAA GCGATTATTG CCCCCTGTCG TTGTCGGTCC GGTAATTATT
GTTATCGGCT TAGGACTAGC ACCTGTCGCG GTCAACATGG CGCTGGGAAA GAGTGGCGAT
GGCAGCCTGG TACTTGTGGA GCAAAATACG GCACTCATCA TCTCGCTATC GGCACTATTA
ACCACGGTGA GTGTCGCTAT TTTTGCTAAA GGCATTGTAA AATTAATGCC CATTCTCGCA
GGGATCCTTG TCGGTTATGG ACTTAGTTTA AGTTTCGGGA TTGTTGATTT CAGTCCCGTA
ACGGCGGCAA GTTGGATTTC CATGCCTAAT TTTGTTGCAC CAGAATTTAA CTGGCATGCT
ATCGCATTCA TGATACCTGT GGCCATCGCA CCTGCTGTGG AGCATATTGG CGACATTCTT
GCTATTTCCA ATGTAACTGG TAAAGACTTT TTGAAAAAAC CAGGGCTTCA CCGTACACTC
GCTGGCGATG GCGTAGCTAC AATCGCCGCT TCAGCTTTCG GTGGACCACC AAATACCACC
TATTCAGAAG TGACTGGTGC TGTGACACTG ACTAAGTCGT TTAATCCTGT GATCATGACT
TATACTGCAA TCACCGCCAT TATTCTGGCC TTTATCGGCA AGCTTGGTGC ACTAATGCAA
ACCATCCCAG TCCCCGTTAT GGGCGGCATC ATGTGTCTAT TGTTTGGCTC AATTGCCGCT
GTTGGTTTAA ATGCGTTAAT TAAGAATAAT GTTGACCTGA ATGAACCCAG AAATCTCTGT
ATTGTAGGTG TGACCTTGGT ATTTGGTATT GGCGGTATGG CCTTTGGTAT TGGCTCATTC
AGTCTGACAG GTATTAGCCT GTGTGGGATC GTGGCGATCA CGATGAACTT GCTACTGCCT
ATGCCTAAAG AGGAAGCAAC GGCATAA
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| Protein sequence | MKNIALALQG AQMLFVAFGA LVLMPLLTGL DTNVALFTAG IGTLLFQLIT KRQIPIFLAS
SFAFIAPIMY GVQTWGLPST MGGLMAAGAV YLMLASLIKL RGDNFIKRLL PPVVVGPVII
VIGLGLAPVA VNMALGKSGD GSLVLVEQNT ALIISLSALL TTVSVAIFAK GIVKLMPILA
GILVGYGLSL SFGIVDFSPV TAASWISMPN FVAPEFNWHA IAFMIPVAIA PAVEHIGDIL
AISNVTGKDF LKKPGLHRTL AGDGVATIAA SAFGGPPNTT YSEVTGAVTL TKSFNPVIMT
YTAITAIILA FIGKLGALMQ TIPVPVMGGI MCLLFGSIAA VGLNALIKNN VDLNEPRNLC
IVGVTLVFGI GGMAFGIGSF SLTGISLCGI VAITMNLLLP MPKEEATA
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