| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2441 |
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| Symbol | |
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| ID | 5609910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2963647 |
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| End bp | 2964357 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933352 |
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| Product | DNA replication initiation factor |
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| Protein accession | YP_001474178 |
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| Protein GI | 157375578 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.689375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0202229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAATCGA ACTCACCTTT ACAACTATCA TTACCGGTAC ACCTGCCTGA TGATGAAACA
TTTAATAGTT ATTACCCTGC AGCGGGTAAT GACGAACTCA TTCAAAGTCT ACAAGCCTGC
GCCGAAGGGC GGGCAGATCG AAGCGTTTTC TTATGGGGAC CGGTCAAGTC AGGCCGAACA
CACCTTATGC ATGCCGCTTG TGCTCATGCG AACGATTTAG AGCGAAGTAG TTTTTATCTG
CCTTTGGGTA TTCATGCAAG CATATCGCCT ATGCTTCTCG AAGGTTTAGA ACAGCTCGAT
CTTATCTGTA TTGACGATGT CGATGCCATT GCGGGCCATC CCCTCTGGGA AGAAGCTATT
TTCGATCTTT ATAATCGCGT TTCAGAGCAC GATAATTGTT CTTTGATTGT TAGTGCGAGT
GTTTCGCCAA ATGATTCAGG TTTTGCACTC CCTGACCTCG TATCTCGAAT GCAGTGGGGA
TTGAATTATC AGTTACAACC CATGGCCGAT GATGAGAAGT TAGCCGCATT ACAACGGCGG
GCCGCTATGC GCGGACTACA GTTACCCGAA GATGTAGGAC GCTTTCTATT GAACCGTTTA
GCAAGAGATT TAAGAACCTT GTTTGATGTG TTAGACAGAC TGGATAAAGA CTCCCTCGTT
CACCAGCGAA AGCTAACCAT TCCCTTCGTA AAAGAGATGC TTAGACTGTG A
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| Protein sequence | MKSNSPLQLS LPVHLPDDET FNSYYPAAGN DELIQSLQAC AEGRADRSVF LWGPVKSGRT
HLMHAACAHA NDLERSSFYL PLGIHASISP MLLEGLEQLD LICIDDVDAI AGHPLWEEAI
FDLYNRVSEH DNCSLIVSAS VSPNDSGFAL PDLVSRMQWG LNYQLQPMAD DEKLAALQRR
AAMRGLQLPE DVGRFLLNRL ARDLRTLFDV LDRLDKDSLV HQRKLTIPFV KEMLRL
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