| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2438 |
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| Symbol | |
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| ID | 5609661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2960729 |
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| End bp | 2961079 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933349 |
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| Product | arsenate reductase |
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| Protein accession | YP_001474175 |
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| Protein GI | 157375575 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1393] Arsenate reductase and related proteins, glutaredoxin family |
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| TIGRFAM ID | [TIGR00014] arsenate reductase (glutaredoxin) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00647081 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACTCAAG TTACTATCAT CCACAACCCA CGTTGTTCAA AAAGCCGTCA AACTCTGGCG
TTGTTACAAG AACAAGACTG TCAAATTCAA GTTGTGGAGT ACCTGAAATC GCCATTAGTC
AGAAGTGAAA TCGAAGGCTT ATTGGCAAAG CTCAATATCA GTGCTCGCGA ATTGATGCGC
ACTAAAGAAG TAGAATATAA AGAGCAAGGC TTAGCAGATA TTAATCTCAC AGAAGCACAA
CTTATCCAGG CTATAATCCA AACACCAAAA CTGCTCGAAC GCCCAATTGT GCTCGCCAAT
GACAAAGCCG CCATTGGCCG ACCACCTGAA AACGTGCTTT CAATATTATA A
|
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| Protein sequence | MTQVTIIHNP RCSKSRQTLA LLQEQDCQIQ VVEYLKSPLV RSEIEGLLAK LNISARELMR
TKEVEYKEQG LADINLTEAQ LIQAIIQTPK LLERPIVLAN DKAAIGRPPE NVLSIL
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