| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2431 |
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| Symbol | |
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| ID | 5613776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2954483 |
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| End bp | 2955022 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933342 |
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| Product | amino acid-binding ACT domain-containing protein |
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| Protein accession | YP_001474168 |
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| Protein GI | 157375568 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2716] Glycine cleavage system regulatory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0267912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00010475 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCAACC ATCTTGTTGT TACTGCGCTG GGTGCCGATC GCCCTGGAAT TGTCAGTAAA
TTTGCAAGAC TTGCAAGTGA ATGCGACTGC GATATTGTCG ATAGTCGAAT GGCCTTATTT
GGTAACGAAT TCACATTAAT CATGATGCTA TCCGGCTCTT GGGCTTCAAT CACTAAAGTT
GAAACAAATC TTCCGAGTCT CAGTGTAGAA CTCGAATTGA TGACTGTAAT GAAGCGAACC
TCGAAGCATA CAGCTCAAAA TTACATATCC AGACTCGAAG TCACGTTCAG TGGTAGCAAC
CAACGCGGCA CCATGAAGAA GATAACTCAA TTTCTTGCCG ACCGCTCCTT GGATCTGGCA
GCCGTGAGAT CCCATGCCGA TGAAGATGAT CAAGGCGACC CGTCTCAAAA CGTTTTCCTC
ACCATTAATG TTCCAGAGAA AGTTGATCTG GATAAATTAG AAACCAGCAT TAATGAACTC
GCAGATGAAG TCGCGTTAGA GTGCACAATC AAGCGTATGC AAGGCATAAC ATCAAAATAA
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| Protein sequence | MSNHLVVTAL GADRPGIVSK FARLASECDC DIVDSRMALF GNEFTLIMML SGSWASITKV
ETNLPSLSVE LELMTVMKRT SKHTAQNYIS RLEVTFSGSN QRGTMKKITQ FLADRSLDLA
AVRSHADEDD QGDPSQNVFL TINVPEKVDL DKLETSINEL ADEVALECTI KRMQGITSK
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