| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2413 |
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| Symbol | |
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| ID | 5609773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2935481 |
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| End bp | 2935867 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933324 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474150 |
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| Protein GI | 157375550 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3603] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.753128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000411469 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCGCGAA TGACTCTAGC CGTTCATTCT CAACTCTATA GCATTCATAG CTTCAGTCCT
GACGCTTCTA TTGCAGCAGA GATATTCCAA CAAGATATGT TTTTTGTTGG AAAAACCAAA
GATGAGTTAT CCGTGGTCGT TCCAGCAGAA CTTAATCTCG ATAGTCTCGA AGAGGAGAGT
AACTGGCGCT GTATCGAAGT GATTGGTCCG TTAGGCTTCT CGATGACGGG TATTCTGGCC
AGCGTATCGG GTGCTTTGGC CGACGCAGAC ATTAGTATCT TTGCTATATC GACGTTCGAC
ACCGATTACA TCTTAGTTAA GAGAGATAAA TTATCTAAGG CTATCATCGC TTTAAAAAAG
AAAAACTATC AGATCACGGA ATATTAG
|
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| Protein sequence | MARMTLAVHS QLYSIHSFSP DASIAAEIFQ QDMFFVGKTK DELSVVVPAE LNLDSLEEES
NWRCIEVIGP LGFSMTGILA SVSGALADAD ISIFAISTFD TDYILVKRDK LSKAIIALKK
KNYQITEY
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