Gene Ssed_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2397 
Symbol 
ID5613644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2918227 
End bp2918685 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content42% 
IMG OID640933308 
Producthypothetical protein 
Protein accessionYP_001474134 
Protein GI157375534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAA GCCCAAACTT ATTTAAACGA TTACTTAATC TTTACCCGCC TTACCTCGGA 
GCGGGCATTA AAATTACCTA TATTAGCCAG GATTGGCGTG AGCTACATGT ATCCATGTCT
GTGCGTTGGT TTAATCGTAA CGCGGTTAAT ACCCACTTTG GCGGTAGTCT CTACTCCATG
GTCGATCCAC ATCTGATGTT ACTTTTGATG CGGCTGCTCG GTGATGGATA CTGGGTATGG
GACAGTGCAG CAAATATCGA GTTTTTAAAG GCGACCAGAA AAACGGTGCG ATGTGTGATC
GCAATTTCAG ATGACCAATT GGAGCAAATT AAACTTAAAA CAGATAGTGG TGAGAAATAT
TTCCCTTCAT TCACTTTAGA GATAAAAGAT GAAATGGGTG ATGTGATAGC CAAGGTGAAT
AAGACTCTCT ATGTAAAGAA AAAGCCGCAC AAGACTTAG
 
Protein sequence
MKLSPNLFKR LLNLYPPYLG AGIKITYISQ DWRELHVSMS VRWFNRNAVN THFGGSLYSM 
VDPHLMLLLM RLLGDGYWVW DSAANIEFLK ATRKTVRCVI AISDDQLEQI KLKTDSGEKY
FPSFTLEIKD EMGDVIAKVN KTLYVKKKPH KT