| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2384 |
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| Symbol | |
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| ID | 5612993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2900562 |
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| End bp | 2900981 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933295 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474121 |
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| Protein GI | 157375521 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0432] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGTTCC AAAAAGAAGT CAGCCTCAAA GCAAGACGAC GAGGTTTTTA CCTTATTAGC
GATGAAATTT GTGATGCTAT ACCTGAGATT AACCAGCTAA GCGTTGGGCT GGTTCATATT
CTGCTTCAGC ATACCTCAGC CGCACTGACC TTAAACGAGA ATGCAGATCC AAGTGTCAGA
GAGGATTTCG AGCGATTCTT CAATCGATTG GCGCCTGAAA ATGAGCACTA TTACACACAT
ACCTATGAAG GTCCGGATGA CATGCCAGCC CACCTTAAAT CATCACTGCT TGGCTGTGAA
CTCACTCTGC CAATCACCAA TGGCAAGTTA AACCTTGGGA CCTGGCAAGG GATATATCTA
TGTGAGCCCA GAGACAGGGC CGGTAGTCGA AGAGTTGTTG TGACGATACA GGGCGAATAA
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| Protein sequence | MWFQKEVSLK ARRRGFYLIS DEICDAIPEI NQLSVGLVHI LLQHTSAALT LNENADPSVR
EDFERFFNRL APENEHYYTH TYEGPDDMPA HLKSSLLGCE LTLPITNGKL NLGTWQGIYL
CEPRDRAGSR RVVVTIQGE
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