Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2373 |
Symbol | |
ID | 5611425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2887208 |
End bp | 2888524 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640933284 |
Product | hypothetical protein |
Protein accession | YP_001474110 |
Protein GI | 157375510 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0606] Predicted ATPase with chaperone activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.548259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.836855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAGAG TGAATGCCGG CGATTCCATG CGAGAGCATA GAGTCGTAAA TACGAGTGTA AATTCTGAAT TGGCTCCGAG ACCTAAATCA ATTGAAGATA CGGGCATTCA AGAGTCTCTT TTACTTGACC TTATGCTTAA GCATCTACTC GGAGGCGGGG TATTAACTAA ATCTGAATTG GTTATGAAGA TGGGCATTTC TGGCGGCATT ATTCAAAACC TGTTGGATAA TGCTAAACAG CTTGCTTGGG TTGAAAACAG ACAATCGACT CCCGATGGAC AGATGCGATA TGCGCTAAGT CATGGAGGAG ACGAATACGC CAAACAAGCA TCTGCCAAGA GTGGTTATCG TGGATTAGTG CCAGTGCCGC TTGCTCAGTA CACTGACATT TGTCAGAAAC AATCCAGCCG AAAAAATCCA ATTACCTTAG AGATGTTACA GTACGGATTA CAGGCACTGG TTTTGCCCAA TGATCTTCTG CGCAAGATAG GTCCAGCTCT GAATTCGAGC CGACCGGTTC TTATTTATGG GCCTCCGGGA ACGGGGAAAA GTTATCTTTG CCGTAACCTC AATTTAACGT TAGGTGATAA TGTCCTGATC CCTTATGCAA TTGCAATCGG GAACGAGGTG ATACAAGTTT ATGATCCACA ACTGCACCAT AAGGTTGAGA GCACTACGTC CGTTAATGCT CTGGACTTGG TACAAGGCCA TGACCCTCGC TGGATCGAGT GTAAGAGACC CCTTCGTATT ACCGGTGGTG AATTAAACGC TGAGATGCTA GAGGTGCAAT TTGATAGCCA TAGCCGAACC TACATGGCTC CGATTCAGTT AAAGGCTAAC AATGGCATTT TACTCTTGGA TGATTTAGGT CGTCAAAAGA TCAGCGCAAA ACAGCTTTTT AACCGATGGA TTATTCCTAT GGAAGAGCGA AGAGATTTTC TCTCTCTGCA ATCGGGTGAA CATTTTGAGA TCCCTTTCGA GCTAATCTTA CTTTTTTCTA CTAACCTAAA TCCTAATGAC CTGGTTGATG ATGCATTTCT ACGTCGTCTT GGATACAAGA TTCACTTCGA CGCATTAGAT GAGCCTTTAT ATCGTAGGAT CTGGTTTCAG GTGTGTGAAG AGAAAGGGCT TAGCTGTAGT GAAGAGATGT TTCAGCATCT GCTCATTGAA TTTCATCAGA GGTATGCAAA GCCCTTGATC CCATGTTATC CACGCGATCT GTTGGGAATT ATGGCCGATC AAATGAGTTT TATGGAGTTA AAACCTGAGG TGACGAAGGC ATTAATTACA GAAGCTTGGT CAATCTATTT TGTGTAG
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Protein sequence | MFRVNAGDSM REHRVVNTSV NSELAPRPKS IEDTGIQESL LLDLMLKHLL GGGVLTKSEL VMKMGISGGI IQNLLDNAKQ LAWVENRQST PDGQMRYALS HGGDEYAKQA SAKSGYRGLV PVPLAQYTDI CQKQSSRKNP ITLEMLQYGL QALVLPNDLL RKIGPALNSS RPVLIYGPPG TGKSYLCRNL NLTLGDNVLI PYAIAIGNEV IQVYDPQLHH KVESTTSVNA LDLVQGHDPR WIECKRPLRI TGGELNAEML EVQFDSHSRT YMAPIQLKAN NGILLLDDLG RQKISAKQLF NRWIIPMEER RDFLSLQSGE HFEIPFELIL LFSTNLNPND LVDDAFLRRL GYKIHFDALD EPLYRRIWFQ VCEEKGLSCS EEMFQHLLIE FHQRYAKPLI PCYPRDLLGI MADQMSFMEL KPEVTKALIT EAWSIYFV
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