| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2362 |
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| Symbol | asnC |
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| ID | 5611453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2874993 |
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| End bp | 2876393 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933273 |
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| Product | asparaginyl-tRNA synthetase |
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| Protein accession | YP_001474099 |
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| Protein GI | 157375499 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000563375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00208401 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGCATTA CATCTGTCGC TTCTGTATTT AAAGGTGAAT TTGCGATCGG TTCGCAAGTT
ACTGTTCGCG GTTGGGTAAG ATCTCGCCGA GATTCCAAGG CCGGCATCTC TTTTCTTGCC
GTTTATGATG GTTCCTGCTT TGACCCTATT CAGGGTGTAG TGCCAAATAG CTTAGAAAAT
TATAATGACG AAATCTTAAA ACTAACAGCA GGTTGTTCTG TAGTTATGAC CGGTGAAGTC
GTTGACTCTC CTGGTAAAGG TCAAGCGTTT GAGCTACAAG TGTCTAGTGT TGAAGTTGCT
GGTTGGGTTG AAGATCCAGA TACATACCCT ATGGCAGCTA AACGTCACTC TATCGAGCAC
TTGAGAGAGT TGGCTCATCT GCGCCCACGA ACCAACATTA TTGGTGCAGT AGCGCGAGTA
CGTAACAGCC TATCTCAGGC TATTCATCGC TTCTATCATG AACAGGGCTT CATCTGGGTC
TCGACACCGC TTATTACTGC GTCAGACGCT GAAGGTGCCG GAGAGATGTT CCGTGTTTCG
ACTCTCGATA TGGAAAATCT CCCACGTAAC GACGAAGGTA AAGTCGATTA CAGCGAAGAC
TTCTTCGGTA AAGAGTCTTT CTTGACCGTT TCAGGTCAGT TAAACGCAGA AACCTACGCG
AGTGCACTGT CTAAGGTTTA TACTTTTGGC CCCACTTTCC GCGCAGAGAA CTCAAACACC
AGTCGTCACT TAGCTGAATT CTGGATGGTT GAGCCTGAGG TTGCATTTGC CGATCTCGAT
GATGTCGCGG GTCTTGCCGA GCAGATGCTG AAATTCTGTT TCAAAGCCGT ACTGGAAGAG
CGCCGTGATG ACCTTGAATT TTTCGCCCAG CGCGTCGATA AAACAGTTAT CGATCGTCTC
GAGTCATTTG TAAGCAGTGA TTTTGCTCAA GTCGACTATA CCGATGCGGT AGAGATCCTT
AAGAGTTGTG GTAAGAAGTT TGAATATCCC GTTGAGTGGG GAATCGATCT TCAATCCGAG
CACGAGAGAT ACTTGGCTGA AGAGCATTTC AAGGCTCCGG TTGTTGTTAA AAACTATCCA
AAAGACATCA AGGCATTCTA CATGCGCCTC AATGATGATG GTAAAACCGT TGCCGCGATG
GATGTACTCG CACCAGGCAT TGGTGAGATC ATCGGTGGAG CACAGCGTGA AGAACGTCTG
GATGTACTTG ATGCACGTCT CGAAGAGATG AACCTGAGTA AGGAAGACTA CTGGTGGTAC
CGTGATATGC GCCGCTACGG TACCGTCCCG CATTCAGGTT TCGGTCTTGG TTTTGAGCGT
CTGGTTTCAT ATGTTACAGG TGTTTCTAAC ATCCGTGACG TGATCCCATT CCCTCGTGCA
CCAAAATCGG CAAGCTTCTA A
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| Protein sequence | MSITSVASVF KGEFAIGSQV TVRGWVRSRR DSKAGISFLA VYDGSCFDPI QGVVPNSLEN
YNDEILKLTA GCSVVMTGEV VDSPGKGQAF ELQVSSVEVA GWVEDPDTYP MAAKRHSIEH
LRELAHLRPR TNIIGAVARV RNSLSQAIHR FYHEQGFIWV STPLITASDA EGAGEMFRVS
TLDMENLPRN DEGKVDYSED FFGKESFLTV SGQLNAETYA SALSKVYTFG PTFRAENSNT
SRHLAEFWMV EPEVAFADLD DVAGLAEQML KFCFKAVLEE RRDDLEFFAQ RVDKTVIDRL
ESFVSSDFAQ VDYTDAVEIL KSCGKKFEYP VEWGIDLQSE HERYLAEEHF KAPVVVKNYP
KDIKAFYMRL NDDGKTVAAM DVLAPGIGEI IGGAQREERL DVLDARLEEM NLSKEDYWWY
RDMRRYGTVP HSGFGLGFER LVSYVTGVSN IRDVIPFPRA PKSASF
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