| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2349 |
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| Symbol | |
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| ID | 5611328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2856379 |
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| End bp | 2858979 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933260 |
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| Product | bifunctional acetaldehyde-CoA/alcohol dehydrogenase |
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| Protein accession | YP_001474086 |
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| Protein GI | 157375486 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases
[COG1454] Alcohol dehydrogenase, class IV |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00292479 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000238757 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGTGA CAAATGAACA AGAACTCGAT CTTCTTGTAC AACGTGTAGC AGATGCTCAG
GCCGAATATG CAAATTTCAG TCAGGAGCAG GTAGATAAAA TATTTCGAGC TGCGGCACTC
GCCGCTGCAG ATGCCAGGAT CTCATTAGCC AAGATGGCTG CCAATGAAAC TGGCATGGGT
GTGATTGAAG ATAAAGTGAT TAAGAATCAC TTTGCATCTG AATACATCTA CAACAAATAC
AAAGATGAGA AGACATGTGG GATATTGGAT GAAGATCCGA CATTCGGCAC CATTACTATA
GCGGAACCTG TCGGCATTAT TTGTGGCATC GTGCCAACGA CAAACCCGAC TTCTACCGCC
ATTTTCAAGG CATTGATCAG CCTCAAGACT CGTAACGGCA TTATTTTCTC ACCTCACCCT
CGCGCCAAAG AGTCCACGAC TACAGCTGCA AGGTTAGTAT TAAATGCAGC CATCGAAGCC
GGCGCACCTA AAGATATTAT CGGTTGGATC GACGAGCCTA GTGTTGCCCT CTCAAATCAG
TTGATGACCC ACGACAAGAT TAACCTGATC TTGGCAACTG GTGGACCAGG AATGGTTAAA
GCGGCCTACT CTTCAGGAAA GCCGGCTATC GGTGTTGGCG CAGGTAACAC CCCAATTGTC
ATCGATGAAA CCGCAGATAT TAAACGTGCT GTGAGCTCAA TATTGATGTC TAAAACATTC
GATAACGGCG TGGTCTGTGC CTCCGAACAA GCCGTCGTGA TTGTCGATGA GATATACGAT
ACCGTTAAGG AACGTTTTGC TACACATGGT GGCTATATCT TATCTAAAGA TGAAACAGCT
GCGATGCAGA ATGTCATCTT AAAAAATGGT GGCCTCAATG CCGATATCGT CGGGCAAAGC
GCTGTAACCA TAGCCGCCAT GGCCGATATC GAAGTTCCGA GCTGGACTAA GGTATTGATT
GGTGAAGTGG AAGATGTTTC TGAAGCTGAA GCATTTGCTC ATGAAAAACT ATCGCCATTG
TTGGGTATGT ATCGAGTCAA AGACTTCGAA GCTGCCATGG ATAAAGCCGA AGCTCTGGTT
ACATTGGGTG GTATTGGTCA CACATCGGGT CTGTACACCA ACCAAGATAC ACAAACTGAG
CGCGTGATGG CATTTGGTTT CCGCATGAAG ACTGCGCGAA TATTGATTAA CACTCCAGCA
TCACAAGGTG GTATTGGCGA TCTTTATAAC TTTAAACTAG CGCCTTCACT TACACTGGGT
TGTGGTTCTT GGGGAGGTAA CTCTATCTCT GAAAACGTGG GTCCAAGTCA CTTAATCAAT
AAGAAAATGG TCGCTAAGAG GGCTGAAAAT ATGTTGTGGC ACAAGCTACC GTCTTCAATT
TACTTCCGTC GCGGTAGCCT ACCTATTGCA CTCGAAGAGT TGAGTGATAA GAAACGCGCC
CTTATCGTTA CAGATAAATA CCTATTTAAT AACGGTTACT GTGATGAGAC GATTAAGATC
CTAAAATCTC AAGGCCTCGA GACCGAAATC TTCTACGAAG TGGAAGCCGA TCCAACCTTA
GCAATTGTCA CTCAAGGCGC TAAGATGGCT CAGAGCTTCC AACCCGATGT GATTATCGCG
CTTGGCGGTG GTTCTCCAAT GGATGCAGCT AAAATCATCT GGGTGATGTA TGAGCATCCC
GATGTAGACT TTGCCGACTT GGCATTGCGC TTCATGGATA TTCGTAAGCG TATCTATAAA
TTCCCTAAAT TGGGTGTTAA GGCGCAGATG GTTGCCATCC CTACAACTTC AGGTACAGGT
TCAGAAGTGA CACCGTTTGC GGTTGTTACC GATGAAAAAA CCGGCATGAA GTACCCTATT
GCCGATTATC AGCTAACACC GAATATGGCG ATTGTGGATC CGAACCTTGT CATGGACATG
CCAAAATCAT TAACCGCTTT TGGTGGCATC GATGCGGTAA CCCATGCTCT GGAAGCCTAT
GTCAGTGTGA TGGCCAACGA ATACAGCGAT GGCCAGGCGC TTCAGGCCTT GGATCTACTA
TTTAAGCACC TTCCTGATTC TTATAACCAC GGTGCAGCAG CCCCTATTGC ACGTGAGAAA
GTACACAACG GTGCGACCAT TGCGGGTATC GCCTTTGCTA ACGCTTTCTT GGGAATTTGT
CACTCGATGG CCCATAAGTT AGGCGCCGAG TTCCACCTTG CACATGGTTT GGCCAATGCA
TTATTGATTA ACAATGTGAT CCGTTTCAAC GCAACTGACA TGCCGACTAA ACAAGCGGCC
TTCAGTCAGT ATGACCGTCC TAAGGCACTT TGTCGTTACG CGAAAATTGC AGAATATTTA
AACCTAGGTG GAACGACCGA TGAAGAAAAA GTTGAAGCAC TCATTGAAGA GGTCGATCAA
CTCAAGAAGA CGATTGGCAT TCCGGCTTCG ATCCGAGAAG CAGGAGTCAA CGAAGCCGAC
TTCCTTGCAA AACTCGACGA GCTAGCTGAA GATGCGTTCG ATGACCAATG TACAGGGGCT
AACCCAAGAT ATCCGCTAAT CGAAGAGCTT AAGCAGGTAC TGCTTGCAAG TTTCTATGGT
ACAGCTTACA GCGACAAATA A
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| Protein sequence | MTVTNEQELD LLVQRVADAQ AEYANFSQEQ VDKIFRAAAL AAADARISLA KMAANETGMG
VIEDKVIKNH FASEYIYNKY KDEKTCGILD EDPTFGTITI AEPVGIICGI VPTTNPTSTA
IFKALISLKT RNGIIFSPHP RAKESTTTAA RLVLNAAIEA GAPKDIIGWI DEPSVALSNQ
LMTHDKINLI LATGGPGMVK AAYSSGKPAI GVGAGNTPIV IDETADIKRA VSSILMSKTF
DNGVVCASEQ AVVIVDEIYD TVKERFATHG GYILSKDETA AMQNVILKNG GLNADIVGQS
AVTIAAMADI EVPSWTKVLI GEVEDVSEAE AFAHEKLSPL LGMYRVKDFE AAMDKAEALV
TLGGIGHTSG LYTNQDTQTE RVMAFGFRMK TARILINTPA SQGGIGDLYN FKLAPSLTLG
CGSWGGNSIS ENVGPSHLIN KKMVAKRAEN MLWHKLPSSI YFRRGSLPIA LEELSDKKRA
LIVTDKYLFN NGYCDETIKI LKSQGLETEI FYEVEADPTL AIVTQGAKMA QSFQPDVIIA
LGGGSPMDAA KIIWVMYEHP DVDFADLALR FMDIRKRIYK FPKLGVKAQM VAIPTTSGTG
SEVTPFAVVT DEKTGMKYPI ADYQLTPNMA IVDPNLVMDM PKSLTAFGGI DAVTHALEAY
VSVMANEYSD GQALQALDLL FKHLPDSYNH GAAAPIAREK VHNGATIAGI AFANAFLGIC
HSMAHKLGAE FHLAHGLANA LLINNVIRFN ATDMPTKQAA FSQYDRPKAL CRYAKIAEYL
NLGGTTDEEK VEALIEEVDQ LKKTIGIPAS IREAGVNEAD FLAKLDELAE DAFDDQCTGA
NPRYPLIEEL KQVLLASFYG TAYSDK
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