| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2345 |
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| Symbol | |
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| ID | 5610359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2852145 |
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| End bp | 2852732 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933256 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474082 |
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| Protein GI | 157375482 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1896] Predicted hydrolases of HD superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.267418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000795999 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGTCACT TATTCGCCCA TCTCGCTCGC ATGAAATTAA TTCAACGCTG GCCATTAATG
TACAATGTTA GAAGTGAAAA TGTGCAGGAA CACTCCTTGC AAGTGGCTAT GGTTGCACAT
GCCCTGGCCA TCATTAGCAA TCAAAAATTT GGAACGCAAC TGAGTCCGGA TAGAGCCGCT
ACCGTCGCTA TCTTTCACGA CGCCAGTGAG ATCTTGACAG GTGATCTCCC TACCCCGGTT
AAATATTTCA ATAAAGAGAT AGAGGCCGAG TATAAAAAAA TCGAGGCCAT CGCAGAACAC
AGACTGTTAG AGATGGTGCC TGAGGAGTTT AAAAGTGATT ACCAGTCGCT GTTATCCAGT
GAGTATGCCG ACAGTGAATA TAAACAGCTG GTTAAATCCG CCGATACCCT TTGTGCATTC
CTTAAATGTT TAGAAGAGCA TAGGGCCGGG AATAATGAAT TTAATACTGC CAGGAAACGA
CTCGAGCAGT CGTTAGAGCA AGATCCGAAC CCGGCAGTTA AATATTTCAT CGACTGCTTT
ATTCCCAGCT TTAAACTAAA CCTGGATGAC ATTAACAGAT TACTTTAA
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| Protein sequence | MSHLFAHLAR MKLIQRWPLM YNVRSENVQE HSLQVAMVAH ALAIISNQKF GTQLSPDRAA
TVAIFHDASE ILTGDLPTPV KYFNKEIEAE YKKIEAIAEH RLLEMVPEEF KSDYQSLLSS
EYADSEYKQL VKSADTLCAF LKCLEEHRAG NNEFNTARKR LEQSLEQDPN PAVKYFIDCF
IPSFKLNLDD INRLL
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