| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2326 |
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| Symbol | |
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| ID | 5611170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2823258 |
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| End bp | 2824325 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640933237 |
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| Product | quinolinate synthetase |
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| Protein accession | YP_001474063 |
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| Protein GI | 157375463 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0379] Quinolinate synthase |
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| TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00278867 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCTGT CAGCCCCACA AATCGAAAGT GTTCAATATC CATTTCCTGC TAAGCCATTG
CCGTTAACCG ATCTTGAAAA GGCTAACTAC AAGGCTCGTA TCAAACAGTT GTTGGTTGAA
AGAGACGCTG TGTTGGTCGC GCATTACTAT ACCGATCCCG AGATACAGGC GTTAGCCGAA
GAGACGGGCG GTTGTGTTTC TGATTCACTG GAAATGGCAA GGTTTGGGCG TGATCACCCG
GCAAAAACCT TGATCGTTGC CGGTGTTAAA TTTATGGGGG AAACCTCAAA GATTCTAAGC
CCCGAGAAAA CGGTTTTGAT GCCGACGCTT GAAGCCACGT GTTCTCTCGA TATTGGTTGT
CCGATCGATA CTTTCAGCAA GTTCTGTGAT GCTCACCCGG ATCATACCGT GGTGGTATAC
GCTAACACAT CGGCGGCGGT TAAGGCTCGT GCGGACTGGG TGGTGACCTC GAGTATCGCG
CTTGAGATCG TTGAGCACTT AGATAGTCAG GGTAAGAAGA TTATCTGGGG ACCGGACCGT
CATCTGGGTA GCTATATCGC CAAGCAAACC GGTGCCGAAA TGCTGATGTG GCAAGGTGAT
TGTATCGTTC ATGACGAATT TAAGGCCAAG GCGCTGCGAG AGCTCAAGAT TAAAAATCCA
GATGCGGCCA TTTTAGTGCA CCCGGAATCG CCTGCTAGTG TCGTCGAACT GGCCGATGCC
GTTGGTTCGA CGAGCCAGCT AATCAAGGCC GCACAAACCA TGGATAATGA CACCTTTATC
GTTGCAACCG ATAGAGGCAT CTTCTACAAG ATGCAGCAAG GGGCGCCGGA TAAAATATTG
ATAGAAGCGC CAACAGGCGG AAATGGTGCT ACTTGTCGAA GCTGTGCTCA CTGTCCCTGG
ATGGCGATGA ATGGCCTTCA GGCCATCGAA GCTTCATTGA CTGCCACAGA TACATCTCCC
CATGAGATAT TTGTGGATGA TGACCTGCGT GAAGCAGCAC TCATTCCGCT TGACCGTATG
CTGAATTTCG CACAGACATT AAATATGAAA GTGAAAGGCA ACGCGTAA
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| Protein sequence | MSLSAPQIES VQYPFPAKPL PLTDLEKANY KARIKQLLVE RDAVLVAHYY TDPEIQALAE
ETGGCVSDSL EMARFGRDHP AKTLIVAGVK FMGETSKILS PEKTVLMPTL EATCSLDIGC
PIDTFSKFCD AHPDHTVVVY ANTSAAVKAR ADWVVTSSIA LEIVEHLDSQ GKKIIWGPDR
HLGSYIAKQT GAEMLMWQGD CIVHDEFKAK ALRELKIKNP DAAILVHPES PASVVELADA
VGSTSQLIKA AQTMDNDTFI VATDRGIFYK MQQGAPDKIL IEAPTGGNGA TCRSCAHCPW
MAMNGLQAIE ASLTATDTSP HEIFVDDDLR EAALIPLDRM LNFAQTLNMK VKGNA
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