| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2320 |
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| Symbol | cls |
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| ID | 5611223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2813076 |
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| End bp | 2814548 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933230 |
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| Product | cardiolipin synthetase |
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| Protein accession | YP_001474057 |
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| Protein GI | 157375457 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.254629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00334531 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCACT ATTCAATGGC ACATTTTTAT CAACTGCTAA CCCTGGCAGG CATCCTGTTC
TACTGGGTCA TCATTGCTGG CATTACCGTA AGAATTATTA TCAAGCGTCG ATCTGTCGGT
GTCTCCTTTG CGTGGATGAT GGTCATTTAC GTCATCCCTA TCGTTGGCAT TTTTGCCTAC
CTGCTTTTTG GTGAGCAGAA TATCGGCCGA ACCCGGGCCC AACGCGCAAA AGATATGTAT
CAACCCTACG CCGATTGGTT CGCCCACCTC TATAAAATCC GCCAGTATCG GCCGAATGTT
TTGAGCTCAC ATGCTCAATC TATCAGCGCC CTGTGTGAGA ACCAATTGGG GATCCCTTCA
TTGGCGGACA ATGCCCTTGA ATTACAATCG ACACCCAAGC AGATCCTGAA CTCTCTCATC
AAAGATATTG ATAGGGCAAA GTCGACGATT CATCTGGAGT TTTATATCTG GCACCCCGGT
GGCATGGCCG ATGACGTGGC GTTAGCTCTG ATTAATGCCG CAAAGCGTAA TGTATCCGTT
AAATTATTAT TAGATTCAGC CGGCAGCAAT CAATTTTTTC GAAGCCAATG GCCAGCCATA
CTCGAGGCCG AGGGGATCCA TATTGCAAGG GCATTAAAGG TAAGCCCCAT CAGAGTCCTG
TTTCGACGTA TGGATCTCAG AATGCACAGA AAGATAGTCG TTATTGATAA TAGCATTGCC
TATACAGGTT CAATGAACCT GGTCGATCCA AGCTGTTTTA AGACCAATTC GGGTGTCGGG
CAATGGATCG ATGTTATGGT CAGAATAAAG GGCACCACGG TCCCTCTGCT CAATGCCATT
CAGTCATGGG ATTGGGAAGT GGAAACGAAT CAACGTCTAT TGCCCGAACT TCCTGTTTGT
AAGCCCCATA CCGAACCTGA AAAAGTCGAT ATGGTCCAGG TGATCCCATC GGGCCCGGGG
ATGCCGGAAG AGATCATCCA TGAAGTTCTG CTGCAAAGCA TATATCAAGC GGAACATAAA
ATTGTGATCA CTACCCCCTA CTTCGTACCC AGTGAGAACC TGTTGGTTGC GCTCATTGCT
GCATCCCATC GAGGTGTCTG CGTTAACATT ATCATTCCTC ATAAGAATGA CTCCGTCATG
GTCGAGTGGG CCAGCCGTTC ATTTTTTTGT GAGCTGTTAA GCGCCGGAGT TAAAATACAT
AGATTCAACG GTGGCCTGCT ACATACCAAG TCTGTGGTCA TCGACGAAAG TCATTGCCTT
ATCGGCACGG TCAATCTGGA TATGCGCAGC CTATGGTTAA ACTTCGAGGT GACACTGGCC
GTGGATGACC AGAACTTCAC AGACCAAATG AATCTTCTCC AACAGTCTTA CATAGATAAT
GCCCATCTTG TCGATATTGA GGCTTGGCAA AAGCGCCCCG TCTACAAACG AGTCATCGAG
CAGTTTTTCT ACCTCTTCAG TCCGCTACTC TAA
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| Protein sequence | MAHYSMAHFY QLLTLAGILF YWVIIAGITV RIIIKRRSVG VSFAWMMVIY VIPIVGIFAY
LLFGEQNIGR TRAQRAKDMY QPYADWFAHL YKIRQYRPNV LSSHAQSISA LCENQLGIPS
LADNALELQS TPKQILNSLI KDIDRAKSTI HLEFYIWHPG GMADDVALAL INAAKRNVSV
KLLLDSAGSN QFFRSQWPAI LEAEGIHIAR ALKVSPIRVL FRRMDLRMHR KIVVIDNSIA
YTGSMNLVDP SCFKTNSGVG QWIDVMVRIK GTTVPLLNAI QSWDWEVETN QRLLPELPVC
KPHTEPEKVD MVQVIPSGPG MPEEIIHEVL LQSIYQAEHK IVITTPYFVP SENLLVALIA
ASHRGVCVNI IIPHKNDSVM VEWASRSFFC ELLSAGVKIH RFNGGLLHTK SVVIDESHCL
IGTVNLDMRS LWLNFEVTLA VDDQNFTDQM NLLQQSYIDN AHLVDIEAWQ KRPVYKRVIE
QFFYLFSPLL
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