| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2315 |
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| Symbol | |
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| ID | 5611124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2805664 |
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| End bp | 2806791 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933225 |
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| Product | peptidase M14, carboxypeptidase A |
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| Protein accession | YP_001474052 |
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| Protein GI | 157375452 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2866] Predicted carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000568724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00110139 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGGATCA GTGCCAATTT TGATGGCGGT AATATTGAAG TCATTAATCA AGACAATATT
AATGACGTAC AACTGGCTAT TCGTCCCGAT GTAGGTAATG AATTTTATCA GTGGTTTAAC
TTTCGTTTAG AGGGGGAAGT CGGTAACCGG TATACCCTTA ATATTATGAA TGCCGGCTCG
GCCTCATATA CAAAAGGCTG GGAAAATTAC CAAGCCGTTG CTACATATGA CAGACAGACC
TGGTTCCGTC TGCCGACGCA ATATGAAGAT GGCAAGCTTA CTATTTTAGT CGATTTGGAT
TGTGATTCTA TTCAAGTCGC TTATTTTGCT CCATACAGTT ATGAACGTCA TCAAGATCTG
CTTGCCGCGA TTCAGGTACA TCCTCAGGTT AGTCTTGAGC ACTTAGGACT CACTCTGGAC
GGTCGCGATC TATCTCTGGT CAAAGTCGGC GATGGTGACG AGTCTAAAGC CAACATCTGG
ATCACCGCGC GTCAGCATCC CGGTGAAACG ATGGCCGAGT GGTTAGTTGA AGGTTTTATC
AATAACCTAC TCGATAGCGA CTGTGCTAAC GCCAAGGCGC TTCTAGATAA GGCGAACTTC
TATATTGTCC CTAACATGAA TCCCGATGGT GGAGTACGTG GTCATCTTCG TACTAATGCG
GCGGGTGTTA ACCTCAATCG TGAATGGCAG AGCCCGTCAT TGGAGAAGAG TCCGGAAGTG
TTCCATGTTA CCCACAAGAT GAAAGAGACA GGTGTCGATC TTTTTTATGA TGTCCATGGC
GACGAAGGTT TACCCTTTGT GTTTCTGGCT GGCTGCGAAG GCGTACCTTC GTTTGATGCT
AAAATGGAAG CGCTGCAGAA AAAATTTGTG GATGCGTTAC TGCTCACCAG CGCCGATTTC
CAATCTGAGT TTGGTTACGA CAAAGATGAG CCAGGTAAGG CCAATCTAAC GGTCGCATCT
AACTGGGTGG CTGAGACCTT TAACTGCCTC TCTAATACCC TTGAGATGCC ATTTAAAGAT
AATGACAATA TGCCCGATCC TATGGCGGGT TGGTCTCCTG AACGTTCGAT ATATTTAGGT
GAAGCGTCTC TAACGGCCAT GCTTGCCGTT GTCGATGAGC TGAGATGA
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| Protein sequence | MRISANFDGG NIEVINQDNI NDVQLAIRPD VGNEFYQWFN FRLEGEVGNR YTLNIMNAGS
ASYTKGWENY QAVATYDRQT WFRLPTQYED GKLTILVDLD CDSIQVAYFA PYSYERHQDL
LAAIQVHPQV SLEHLGLTLD GRDLSLVKVG DGDESKANIW ITARQHPGET MAEWLVEGFI
NNLLDSDCAN AKALLDKANF YIVPNMNPDG GVRGHLRTNA AGVNLNREWQ SPSLEKSPEV
FHVTHKMKET GVDLFYDVHG DEGLPFVFLA GCEGVPSFDA KMEALQKKFV DALLLTSADF
QSEFGYDKDE PGKANLTVAS NWVAETFNCL SNTLEMPFKD NDNMPDPMAG WSPERSIYLG
EASLTAMLAV VDELR
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