| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2310 |
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| Symbol | |
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| ID | 5612069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2799628 |
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| End bp | 2801643 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640933220 |
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| Product | NADH:flavin oxidoreductase/NADH oxidase |
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| Protein accession | YP_001474047 |
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| Protein GI | 157375447 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00279391 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000579308 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTTTC CGCATTTATT AGAACCCTTA GATCTGGGCT TTACTCAGTT AAAAAACCGT
GTGCTTATGG GCTCAATGCA TACCGGTCTT GAAGAGGAAA AGGGCGGTTT TGAGAAACTG
GCAGCTTTTT ATAAGGAACG CGCACTCGGT GGGGTTGGAT TAATCGTTAC CGGCGGCATT
TCACCTAACC TTCGTGGTCG CTTAGCCCCT AATGCCTGCC AGCTCAGTTT TCCCTGGCAA
GTGGGTAAAC ATAAAGTCGT GACCAATGCG GTCCACGAAG CCGGTGGTAA AATCTGTATG
CAGATATTGC ATGCCGGTCG CTATGGTTAC CATCCTTTTT CACAAGCCCC AAGTAAGATT
AAGTCACCGA TCACGCCATT TACCCCATCA TCCATGTCTT CGAGACAAGT AAAGTGCACC
ATTAAGGATT ATGCAACCAG TGCCTCTCTC GCTCAGAAAG CGGGTTATGA TGGCATCGAA
GTGATGGGAA GCGAAGGCTA TCTCATCAAT CAATTTATCA GCAGTCGCAC TAACATAAGA
GACGATGAGT GGGGCGGGAC CTTCGATAAT CGGGTGCGCT TTCCACTCGA AATTGTACGT
TCGATTCGCA AAAAAGTCGG CGACGACTTC ATTATCATTT TCAGACTCTC GATGCTCGAT
CTCGTCGATA ATGGCTCCAG CTGGGATGAA GTCGTTGAAC TGGCAAAGTG GTTAGAAAAA
GCCGGCGTGA CCATAATCAA TACCGGTATT GGTTGGCATG AGGCGAGAGT ACCGACCATC
GCGACCAGCG TACCTCGTGG CGGTTTTGCC TGGGTAACCG AGCGTCTGCA GAAAGAGGTG
TCGATCCCCT TGGTCGCGAC GAACCGAATC AATACGCCTG AGATTGCCGA ACATATACTC
TCTTCTGGTC AGGCAGATAT GGTGTCGATG GCGAGACCTT TCCTGGCAGA TGCCGACTTC
GTGAATAAGG CGGCAGCGGA TACCCCTGAG CTGATTAATA CCTGTATCGG TTGTAATCAG
GCTTGTTTGG ATCATACCTT TGCCTTGAAG CGTGCGACTT GCTTAGTTAA CCCAAGAGCT
TGTTATGAAA CCGAACTCAA CTTTACACCG ACGGTAAACA AAAAACGTAT CGCTGTGATG
GGGGCGGGGC CTGCAGGGAT GGCCTTCTCT ATCTACGCCG CATCTCGTGG TCATGAGGTT
GTCCTATTTG AGGCAAAACC TGAAGTCGGA GGTCAATTTA ACCTCGCTCG TAAGATCCCA
GGTAAAGAGG AGTTCAATGA GACTATTCGT TACTTCAAGG AACAGATGAA ACTCAATAAC
GTCGAGTTGC GCCTCAATAC ACGGCTCGAC GCCTCAGTCG TCAGAGATGA ACATTTCGAT
GAAGTGGTCA TGTCATCGGG TGTGGTACCA AGAAAAATCG ACCTGCCGGG CTTTAATGAC
CCCAGAGTCG TCGACTATCA ACAAGTGTTG AATGGTGAAG TGACTCTAGG TGAAAGCGTT
GCCCTTATCG GTGCCGGTGG TATTGGTTTC GATATGGCAC ATTATCTGTG TGAGCCGGAA
TCTACGACAC TGCAGCCGGA TAAATGGTTG AAGCAGTGGG GCATAGATAA GGGTTACAGC
CACAGAGGGG GATTGATGGA ACCTCAATCG GCCGAGGTAC CTCGTCAAAT CTATCTGCTA
CAACGTAAAA GCACTAAGAT GGGTAAAGGT TTGGGTAAAA CCACCGGATG GATCCATCGT
CTCGTATTGA AAAAGCATCA TGTCCATATG AAAACCGGCG TGTCCTACCA AAAGTTTGAT
GATCAGGGGT TACATATCTC AGTCGATGGT CAGGATGAAA CGCTTGCCGT TGACAATGTC
GTGCTCTGTG CGGGCCAGGA GTCAAACAGA ACGCTGCTCG ATGAGATGAA GGCAACCGGG
TTACCCGTAC ACCTGATTGG CGGTGTCGAT GTTGCCGCTG AGCTCGATGC TAAGCGGGCC
ATCAGACAGG GCGCTGAGCT GGCCATTCGC CTCTAG
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| Protein sequence | MSFPHLLEPL DLGFTQLKNR VLMGSMHTGL EEEKGGFEKL AAFYKERALG GVGLIVTGGI
SPNLRGRLAP NACQLSFPWQ VGKHKVVTNA VHEAGGKICM QILHAGRYGY HPFSQAPSKI
KSPITPFTPS SMSSRQVKCT IKDYATSASL AQKAGYDGIE VMGSEGYLIN QFISSRTNIR
DDEWGGTFDN RVRFPLEIVR SIRKKVGDDF IIIFRLSMLD LVDNGSSWDE VVELAKWLEK
AGVTIINTGI GWHEARVPTI ATSVPRGGFA WVTERLQKEV SIPLVATNRI NTPEIAEHIL
SSGQADMVSM ARPFLADADF VNKAAADTPE LINTCIGCNQ ACLDHTFALK RATCLVNPRA
CYETELNFTP TVNKKRIAVM GAGPAGMAFS IYAASRGHEV VLFEAKPEVG GQFNLARKIP
GKEEFNETIR YFKEQMKLNN VELRLNTRLD ASVVRDEHFD EVVMSSGVVP RKIDLPGFND
PRVVDYQQVL NGEVTLGESV ALIGAGGIGF DMAHYLCEPE STTLQPDKWL KQWGIDKGYS
HRGGLMEPQS AEVPRQIYLL QRKSTKMGKG LGKTTGWIHR LVLKKHHVHM KTGVSYQKFD
DQGLHISVDG QDETLAVDNV VLCAGQESNR TLLDEMKATG LPVHLIGGVD VAAELDAKRA
IRQGAELAIR L
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