| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2297 |
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| Symbol | ihfB |
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| ID | 5611063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2781458 |
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| End bp | 2781745 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933207 |
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| Product | integration host factor subunit beta |
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| Protein accession | YP_001474034 |
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| Protein GI | 157375434 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000102507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000697895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGACAAAAT CCGAACTGAT CGAAAAACTC GCCACGAGGC AGTCGCAGAT GTCGGCTAAA
GAAGTGGAAA GTGCAATCAA AGAGATGTTA GAGCAGATGG CTCAAACATT AGAAGGCGGT
GATCGTATTG AGATCCGTGG CTTTGGTAGT TTCTCTCTTC ACTTCCGTGC GCCGCGTACT
GGCCGTAATC CTAAGACTGG AACATCAGTC GATTTGGATG GTAAGTATGT TCCGCACTTT
AAGCCTGGCA AAGAACTGCG CGAACGTGTT GATGCAATTA ATGCTTAA
|
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| Protein sequence | MTKSELIEKL ATRQSQMSAK EVESAIKEML EQMAQTLEGG DRIEIRGFGS FSLHFRAPRT
GRNPKTGTSV DLDGKYVPHF KPGKELRERV DAINA
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