Gene Ssed_2296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2296 
Symbol 
ID5611045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2781045 
End bp2781335 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content38% 
IMG OID640933206 
Producthypothetical protein 
Protein accessionYP_001474033 
Protein GI157375433 
COG category[S] Function unknown 
COG ID[COG3771] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000100434 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000669948 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGAAGTCAT TTATCATCAC AGTGTTAGTT GCACTGTTTT TCTTTCTTGC ACTGATTTTT 
GGTGCTCGTA ACGAACAAGT TGTGACGATA AGTTATTTCG TTGCTCAGGG TGAGTTTAGA
CTGCCTATTG TGCTCGCTGT TGTGTTTCTT GCGGGTTTCC TCATAAGTTG GATTTTTGCG
ATGTATCATA TTGCCAAACT CAAATTGGCA CTAAGAACCG CAAACAAAAA GAATTTAAAT
CTTGAAAATA AAATTACAGA TCCAACATTG CTTCAGGAAG TAGACGCCTA A
 
Protein sequence
MKSFIITVLV ALFFFLALIF GARNEQVVTI SYFVAQGEFR LPIVLAVVFL AGFLISWIFA 
MYHIAKLKLA LRTANKKNLN LENKITDPTL LQEVDA