| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2279 |
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| Symbol | |
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| ID | 5611575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2756824 |
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| End bp | 2758170 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933189 |
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| Product | FMN-binding domain-containing protein |
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| Protein accession | YP_001474016 |
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| Protein GI | 157375416 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3976] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.399623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.681232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAA ATAATAGATT TAAAAGAAGC CTGGTTTGTT CGGCAGTTAC CATAGCAAGC
TTAGGATTAG CTGGCTGCGC GACGACCCCT ATTGAAGGTA AATACGTTGA CGGTACTCAT
GAAGTCAGCG GTAAAGGTAA AAAAAGCCAA ATCACGCTAA CCGTTAACGT GAAAGAGGGC
AAGATCACCG ATGTCACAAC CAAATCTCAT AAAGAAACCG AGTCACTGTT TCTTAATGCT
GAAAGACTGC TAGCCAAGAT TGTTTCTAAT AACGGTCATG AAGGTATCGA CGCGGTATCC
GGTGCAACTT TCTCATCTAA TGGCATTCTT AAAGCGATTA ATAAGCTCCC CCGAGCGGAT
GGAAGTACCC CTGAATATGT CGCTGTAGGT TCGAAAGAGG TGTCGGGTAA TGATGATTTC
AAACTGAAAT GGTCAATTCA ACCACAGCTT GGCATGATCA TCGGCGATTA CTACTACCAG
GAAGCCAGAT TCCGTCAGGG TCACATGGGT AGCATGGCTA TCGTTGTCGA TAGTGACAAT
GCGAAAGATG TCATCTTCGC GGAGTTCAAT GAGAGCGGTC GTCCCAACTA TTACACCCGA
CTTTTTCAGG ATGTTCCTAA GCGTACCTCA GAGTACAACT TCTCTATGGG CAAGAAAAAG
GGCACAGCCT GGGTGCAGTC AGCCTTAACC ATGGAGAAGT TGATGGTTGA GCAAGACAAA
CTTACCTTCG ACCTGAACCC GGATTACGAT CCCAAGTTAC GTAACAAGTT AAAGCAGCCA
AACCGTCTTA AGTATTCCGG TATTGACGTC GTTGCAGGGG CTTCAAACAG TATCCAGCAG
TCGATGGTTC CGCTAACGGC GAAAATTCAC GCTCAGATCA ATGGTGAAGG GAGCACGCTT
AAATTCTATC AAAATGCTGA AAAGCAGTTA GATAAAAATG GTAAGTGGAC TGGTATTACA
ACCGTATTGC GCTTGATCGT CGATACAGAG ACAAAACAGA TCACAAAGTC ATATTTCGAT
GAAGTTTTCG CTGACGAGAA GAATGAGATA AAAGATGCGT CTCTCAAGAA GCATTACCGT
CAATCTAAAT ATGCCTCAAT CAATTATGTT GAGCCTGCAC GAATTGGTTT TAACGTGATG
TTTGATGCGC TAAACGTTCA TCTTCAACAG GGGGGGTCTC TATTCGACAT TAACGACCTG
CCAGCCACCG GAGACTCCGG CAGTTATGCT GCAACCGGGT TTACCAAACG CTCATCTTCA
TGGGACATCT ACCTCAAGCA GGCCGATATT CTCTACAGCC AGATGAGAGC CGATAACGTT
ATCAAAACAC ATAACAAGCC TAACTAA
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| Protein sequence | MIKNNRFKRS LVCSAVTIAS LGLAGCATTP IEGKYVDGTH EVSGKGKKSQ ITLTVNVKEG
KITDVTTKSH KETESLFLNA ERLLAKIVSN NGHEGIDAVS GATFSSNGIL KAINKLPRAD
GSTPEYVAVG SKEVSGNDDF KLKWSIQPQL GMIIGDYYYQ EARFRQGHMG SMAIVVDSDN
AKDVIFAEFN ESGRPNYYTR LFQDVPKRTS EYNFSMGKKK GTAWVQSALT MEKLMVEQDK
LTFDLNPDYD PKLRNKLKQP NRLKYSGIDV VAGASNSIQQ SMVPLTAKIH AQINGEGSTL
KFYQNAEKQL DKNGKWTGIT TVLRLIVDTE TKQITKSYFD EVFADEKNEI KDASLKKHYR
QSKYASINYV EPARIGFNVM FDALNVHLQQ GGSLFDINDL PATGDSGSYA ATGFTKRSSS
WDIYLKQADI LYSQMRADNV IKTHNKPN
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