Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2265 |
Symbol | |
ID | 5611814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2737783 |
End bp | 2738469 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640933175 |
Product | methyltransferase type 12 |
Protein accession | YP_001474002 |
Protein GI | 157375402 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAACCG AGTTTTACAA CGACAATGCA GATCTGTTAG CCCGCCAGTA CCTATCGACC ACCTTTGAAG AGGTGCATGC TTCCTGGTTA CCTCACCTTA ATCAACTGTT CGACCATCAC GTTTCAGGTT TATCCATATT AGATGTCGGT GCGGGTATTG GCCGCGATTC AAAATACCTG GCCCAGCACT GCTCGTCTCA ACATACGCCA GCAGAACAAA AGGTAGATGT GGTTGCCGTC GAGCCCGCTC ATCTCTTGGC GGACTTAGGT AAGAAGTACA CCAAAGGGCA CAATGTCACT TGGATCGTTG ATAGTTTGCC ACGCCTAAAT CGCCTGACAA TCTACCAAAA TGGATTCAAT CTTATTCTAC TTAGCGCCGT GTGGATGCAC ATTCCACCGA ATGAGCGCAG CGTCGCACTG CAAACCCTCG AAAATCTACT TGCACCCCAT GGCAAGTTGG TTATCTCACT GCGCCACGGG CCAAATAATG ACAACAGAGT CATGCATCCG ATGAGCGTCA ATGAACTAAA GACCTTGGCG AAAAGGGCGC ATCTAGCGAT TGTAGACTCG ACCGATAGAG ATACCGATAA ACTCGGTCGT ACCCAAGTGT TTTGGGAAAC GGTGGTGCTA CAGCGTGCTA ATGATACTGT AGCAAACAGT CCTGCAATAA ATGGCTGTCC TGAATGA
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Protein sequence | MTTEFYNDNA DLLARQYLST TFEEVHASWL PHLNQLFDHH VSGLSILDVG AGIGRDSKYL AQHCSSQHTP AEQKVDVVAV EPAHLLADLG KKYTKGHNVT WIVDSLPRLN RLTIYQNGFN LILLSAVWMH IPPNERSVAL QTLENLLAPH GKLVISLRHG PNNDNRVMHP MSVNELKTLA KRAHLAIVDS TDRDTDKLGR TQVFWETVVL QRANDTVANS PAINGCPE
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