| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2262 |
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| Symbol | |
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| ID | 5611898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2732878 |
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| End bp | 2734032 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640933172 |
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| Product | glucose dehydrogenase |
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| Protein accession | YP_001473999 |
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| Protein GI | 157375399 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTT TACCGTTAAT TTTGACCTTA TTAACTGCAC TGGTCTCAAT AGATAGCCAG
GCAAAACCCT GCGAAGAGTA TCGGCTTGAG AAGGTCGCTG CAGGTCTCGG GATCCCCTGG
GGCATGGCCT TATTAGACTC GAATACACTA TTGGTCACCG AGCGAAGTGG ACAACTGTTA
CAGCTGGATC TTACCACCGG GCAGCGTCAA ACAATTATGG GCTTGCCGCC CATTTACGTC
GATGGACAAG GCGGCTTACT CGATATCCAA CTCGGCCCTT CTAATTCAAG TGATGGCTCT
GGCACTGATA ACAGTAAGGA GCAATGGCTC TATTTCACCT ACTCAAAGCC TGTCTCTGGT
CAGGGCCGAA CCACAATTGC AAGAGCCCAG CTTCGAGGAA ATGAGTTAGT TAACTGGAAA
GATCTACTTA TCACGGAATC GGCAACCGAT ACCGGCCGTC ATTTCGGTTC GCGCATCGCC
TTCGACGACA AAAGCCATCT ATTTTTCTCG GTCGGTGATC GCGGCCATAG ACCCAACGGC
CAGGACTTAA CTACCCACGC CGGTAGCATT CTCCGATTAA ACCTCGATGG CACTGTGCCT
AAAGACAATC CCTTCGTCTC AGGTTCTGAT ATTAGTACTG ACAGCAAAAG TAATGCACTG
CCCGAGATCT ACAGCTATGG CCACCGTAAC CCTCAGGGGC TGACATTTGA TGCTAAAAAC
CAACGCTTAT GGTCGATAGA ACATGGTCCC AGAGGCGGCG ATGAGATTAA TCTGATAAAA
CCCGGCCATA ATTATGGCTG GCCCGTTGTC TCATTTGGCA AGGAGTATTG GGGACCGATT
AGCGTCGGCG AAGGCACATT TAAAGAAGGG ATGGAACCAC CAGTGAAAGT CTATACCCCA
TCCATCGCCC CCTCGAGTCT GTTGGTCTAT TCCGGACGCG CCTTCACCGA ATGGCAAGGC
AATCTGCTCA GCGGTGCACT TAAACTGACG CACCTGAATC GCATCGTACT CGATGGCGAA
CACGCCAGCT CTGAGCATCG ACTGCTGACC GAGCTTAACG AACGGATACG TCAGGTTATC
GAAGATGAAC AAGGTTATCT GCTTATATCC ACAGACAGCG GGAATATATA CCGTCTTAGG
CCCTGTGGTG TTTAG
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| Protein sequence | MKSLPLILTL LTALVSIDSQ AKPCEEYRLE KVAAGLGIPW GMALLDSNTL LVTERSGQLL
QLDLTTGQRQ TIMGLPPIYV DGQGGLLDIQ LGPSNSSDGS GTDNSKEQWL YFTYSKPVSG
QGRTTIARAQ LRGNELVNWK DLLITESATD TGRHFGSRIA FDDKSHLFFS VGDRGHRPNG
QDLTTHAGSI LRLNLDGTVP KDNPFVSGSD ISTDSKSNAL PEIYSYGHRN PQGLTFDAKN
QRLWSIEHGP RGGDEINLIK PGHNYGWPVV SFGKEYWGPI SVGEGTFKEG MEPPVKVYTP
SIAPSSLLVY SGRAFTEWQG NLLSGALKLT HLNRIVLDGE HASSEHRLLT ELNERIRQVI
EDEQGYLLIS TDSGNIYRLR PCGV
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