| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2260 |
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| Symbol | |
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| ID | 5611896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2729564 |
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| End bp | 2730622 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933170 |
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| Product | iron-regulated membrane protein-like protein |
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| Protein accession | YP_001473997 |
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| Protein GI | 157375397 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAA TATTTAAAAC ACTTCATAAC TGGATAGGCT TTTTTATCAG TTTAATCATG
CTGATTGTAT TAACTACCGG TATCTATTTA GGTGGTGCAG ATCTGTTTAA ACGATTGGAC
GATAAAGGTC AGGTCTATTC GGAGCTAACT CATGAGAAAA AGGCTGAGAT AGCTGCCAAT
GCTCTGGCGA ACTACCCGGA GGCATCAGGG GTTAAGTTAC CCACGGAGAT GCATCCCTAT
GTTGATGCTT ATTCTCGTCA GCAATCTGTA TTTCTAACCG CAGGGTTTGA TGAAATTGGC
ACCCAGGTAA AAAGTAAAGA CTCTCTGCAA AGCTGGATGT TCTGGTTTCA TCGCAACTTT
CAGTTGGGTG ATGTGGGCAA ACATGTCAAC GGCATCAGCG CTATCTTAGC AACGGTAATT
ATGTTTATCG GGCTTTACCT TTGGTGGCTT ATTCGTAATG GTTTCAGATG GAAACATACC
TTACCTAAAA CAGGTAAAAA CAGTGCCTTG ATTAAGAGTC ATATCCAGTT AGGGCTTATT
TTTTCAATCC CAATGTTGAT CATGGCAATT AGTGGCGCGT ATATCACTTA TGGTTTCTGG
GGTGATTCTA CACTTGATGA CAATCGACAT AAGCCTACTC TGGCACAAGC TGGTGATTGG
GAGGCACAGA TTGTCGCAGC CCAAAAAATA TGGCCGGAGT CTGAGCTGGT TGCGGTGTCT
AAACCTCGTA AGGTTGAAGG CGATAGTTAT GTCTATTCAC TGAGCTTTAA TGGCGATAAT
GCCTTAGGCC TTATGCAAAC AGACACTATT AAAATTGACC TGAATACGGG TAAGTTAGAT
TCAGCGCAGA CCTTCAGTGA TAAGGGTCTT GCCTATCAAG CTAAATACAG TGCACGTTTC
TTACATGATG GGGCGAGAAT GCCGACCTGG TATCTGCTTA TGCTTATCTT AAGCTCAGTC
GTCGGGACAT TTATGGTGAG TTTTGCCTTG GTGACGTTTG TGAGGAAGGA GGTTCTTGGT
CGAATGAAAA CCAGAGCAGC GCTGCGTTTG CAAAATTAG
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| Protein sequence | MTKIFKTLHN WIGFFISLIM LIVLTTGIYL GGADLFKRLD DKGQVYSELT HEKKAEIAAN
ALANYPEASG VKLPTEMHPY VDAYSRQQSV FLTAGFDEIG TQVKSKDSLQ SWMFWFHRNF
QLGDVGKHVN GISAILATVI MFIGLYLWWL IRNGFRWKHT LPKTGKNSAL IKSHIQLGLI
FSIPMLIMAI SGAYITYGFW GDSTLDDNRH KPTLAQAGDW EAQIVAAQKI WPESELVAVS
KPRKVEGDSY VYSLSFNGDN ALGLMQTDTI KIDLNTGKLD SAQTFSDKGL AYQAKYSARF
LHDGARMPTW YLLMLILSSV VGTFMVSFAL VTFVRKEVLG RMKTRAALRL QN
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