| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2246 |
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| Symbol | |
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| ID | 5612091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2708472 |
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| End bp | 2709518 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933156 |
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| Product | aminoglycoside phosphotransferase |
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| Protein accession | YP_001473983 |
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| Protein GI | 157375383 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.372254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATAA CTATGACAAA TCAATTCTAT TCACTAGATG AAAAGCAACA GTGCCAATTT
TTTGAAAAAC TGCTTAGAGA AGCGATATGC CAATGGCCAG TAGATATCGA ATCATTAGAA
TTAGTCAAAC ACAGAGAAAA TGCGGTATTT AAACTAACGA CAACTTCCGG GGAAAAATAT
GCGGTCAGAG TTCATCGGGC TAATTATCAC ACCAACGATG AACTGCTTTC CGAAATAAAA
TGGAACAAGG CACTGGCCGA TAGCGGCATA GAGACATCTT CATTTTTAAA AACTAAAGAC
GGCAGATATT TTCATGTCGA AAAACGAGAT TATGTCCCGG AGCCTCGTCA GATAGATATT
GTGAAATGGG TCGATGGTGA ACCTCTGGGG TCTATCGAAG CTGGCGTCGA TCTCTCTATT
GAATCTTTAA TGGCCTCTTA TACCTGTATC GGCGAGATCA TGGCAAGGTG TCATAATCAG
GCCAGTCAGT GGGAACTTCC AACAGATTTC ACCCGTCATG CATGGGATGT CGATGGCTTG
TTTGGAAAGT GTCCAACCTG GGGTAAATTC TGGGAACTTG AATGTCTTAA CAACCAGGAG
CGTATCTTAC TGAATACAGT AAAAAAAGAG CTATCTAACG AGTTCAATGA ATTTGGTCAA
ACTCCAGATA GATATAGTCT TATCCATGCC GATATGTTGC CTGAAAATCT ACTGGAATCC
GGAGATAGTT ATTCATTAAT AGACTTTGAT GATGCAGGGT TTGGCTGGCA TATGTTTGAT
ATTGCTACTT CACTATTTTT CCATCTGGGA GAGGAGCATT TCGATGATGT ACTTCACGCC
CTGTTAACCG GTTACCGAAG AGTACGAGAT CTACCCGATG AGCATCTCGC TATGTTGCCA
TCATTCCTGC TAGCCAGAGG GACAACCTAT TTAGGCTGGG CTCATACCCG TAAAGAAACG
GATATTGCAA AGGAACTCAC CCCGATTGTT AAAGCCGGGG TCATAGAGTT GGCGGAGCAT
TATTTATCTC AGCATAAAGC AGCTTGA
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| Protein sequence | MTITMTNQFY SLDEKQQCQF FEKLLREAIC QWPVDIESLE LVKHRENAVF KLTTTSGEKY
AVRVHRANYH TNDELLSEIK WNKALADSGI ETSSFLKTKD GRYFHVEKRD YVPEPRQIDI
VKWVDGEPLG SIEAGVDLSI ESLMASYTCI GEIMARCHNQ ASQWELPTDF TRHAWDVDGL
FGKCPTWGKF WELECLNNQE RILLNTVKKE LSNEFNEFGQ TPDRYSLIHA DMLPENLLES
GDSYSLIDFD DAGFGWHMFD IATSLFFHLG EEHFDDVLHA LLTGYRRVRD LPDEHLAMLP
SFLLARGTTY LGWAHTRKET DIAKELTPIV KAGVIELAEH YLSQHKAA
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