| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2244 |
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| Symbol | |
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| ID | 5612290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2705314 |
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| End bp | 2706456 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933154 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001473981 |
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| Protein GI | 157375381 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.111867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAAGT CAGCGTGCCA CACAATAAAT TCGATTTTGA CACCTAATAC ATCTATTGTT
CCGTCCGGAA CAAATGGTAA TAGTAACGCT TCTGATGAAA AGTTTTTTGA AGAAACCCAA
CTTCCCCTCT CAATCTTGGA TGACTATAAG AGTGCTGCCA GTGAAACCGA GTATGAGATC
TCAGAAAATA CCCGGCGCGT CTATACATCC AGCTATGCGA TATTTAACCG TTATTGCCTG
GAGCATGGAT TAAGTCCACT TCCGGCCGAC CCCCGTTCTG TCATTTCATT TATCGGTCAT
CAAAAAGAGA GCATTCAACA GAGCAGTGGT GCACAGCTTT CCAGGCAAAC ACTGACATCA
AGATTGGCAG CGATCCGGTA TCATCATATT CAAGCTGGAT TTCACTCGCC AACGGAACAC
CCCCTGGTGA TCCGGGTAAT GCGAGGACTG AGCAGAAATA AATATCGAAA AGTCGCAGAC
TACGATCAGC AACCGATAAT GTATGATGAG CTGGAAATGC TGATAGATGT GATCAATCAG
CAGCCGCAAC CAATGACAAG AGCGAGAGAT AAGGCCATTA TTCAACTCGG TTTTCAGGGA
GGTTTTCGTC GCTCTGAGCT TGCCGACATT CAAGTTAACC ATCTCAGTTT TTTGCGAAAC
AAGCTCAAGG TTCGCCTCCC CTACTCCAAG AGTAATCAGC AGGGACAAAG GGAGTGGAAA
GATCTACCGC AAACTGAACC CTTTGCCGCA TTCGATGCTG TTAAAGAGTG GATAGAAGTC
TCAAAAATCA AGCAGGGGCA TCTATTTCGC TCCATCTCAC GAGATGGGAG TCAGATAAGA
CCCTACAGTG TCAGTGATAC AACAAATCGA AAAATAAACC AGACTTCGAT GGATAACGAA
GAACTCCCAC TGTCCCGGTC GAATAGAAAC TGCGGTTTTC TACGCGGTGA TGATATTTAC
CAGATGATAA AGAAGTATTG TGCAAGATCG GGTTTAAGTC CGGAGTTCTA TGGAGCACAT
AGTTTACGTA GTGGTTGTGT TACCCAGCTC CATGAAAATG ATAAAGATCA CCTCTATATC
ATGGCAAGAA CCGGGCACAC AGATCCGAGA TCGCTCAGAC ACTATCTGAA ACCTAAAGAT
TAA
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| Protein sequence | MSKSACHTIN SILTPNTSIV PSGTNGNSNA SDEKFFEETQ LPLSILDDYK SAASETEYEI
SENTRRVYTS SYAIFNRYCL EHGLSPLPAD PRSVISFIGH QKESIQQSSG AQLSRQTLTS
RLAAIRYHHI QAGFHSPTEH PLVIRVMRGL SRNKYRKVAD YDQQPIMYDE LEMLIDVINQ
QPQPMTRARD KAIIQLGFQG GFRRSELADI QVNHLSFLRN KLKVRLPYSK SNQQGQREWK
DLPQTEPFAA FDAVKEWIEV SKIKQGHLFR SISRDGSQIR PYSVSDTTNR KINQTSMDNE
ELPLSRSNRN CGFLRGDDIY QMIKKYCARS GLSPEFYGAH SLRSGCVTQL HENDKDHLYI
MARTGHTDPR SLRHYLKPKD
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