Gene Ssed_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2236 
Symbol 
ID5612391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand- 
Start bp2695933 
End bp2696484 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content45% 
IMG OID640933146 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001473973 
Protein GI157375373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0837369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAAA GCTTAAGTCC GCAGCATTTC AGTGATGTCA TCCAGCTTGG CAATCTGGTT 
CATGGCGCAG GATATTTAGA TCGTCACTCC ATCGAATTAC TTTATAAGAA AGGAATAAAG 
TCCGGTATCA ATGCCAATTT TGTTGCGTAT CAAGATGGGG AACTCTTAGG ATTTAGACTG 
ACCTATGCCC CAGGTCATTG GCTGCCCGAC CGTTGGTGTA CACCAGATGC CTGGGGGATT 
AAACCCAATG AAGTCTGTTA TTTTAAATGC AACACAGTGG CAGAAGGCTC ACGAGGAAAG 
GGGATAGGTG GACAACTGCT TAATGCCTCT ATAGCGGCCG CTAAACTACA GGGTGCTAAG 
GCTGGAGTTA GTCATTTATG GAAACAGAGT CCAAATAATT CAGCCATACG TTATTTTAGT 
AAGGCCGGCG GTGTATTAAT TAAAGAGCAT CCGAATAGGT GGAATGACAC TTTGGAACAT 
CCTGATTACG TCTGCGTGTT GTGTGGTGCC GATTGTCATT GCACGGCCAG TGAAATGCTG 
CTTGTTTTGT AA
 
Protein sequence
MIQSLSPQHF SDVIQLGNLV HGAGYLDRHS IELLYKKGIK SGINANFVAY QDGELLGFRL 
TYAPGHWLPD RWCTPDAWGI KPNEVCYFKC NTVAEGSRGK GIGGQLLNAS IAAAKLQGAK 
AGVSHLWKQS PNNSAIRYFS KAGGVLIKEH PNRWNDTLEH PDYVCVLCGA DCHCTASEML 
LVL