| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2225 |
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| Symbol | |
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| ID | 5612634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2682061 |
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| End bp | 2683257 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933129 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | YP_001473962 |
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| Protein GI | 157375362 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTTA CCCAGGTTGA ACTTGCTCCT GCAGATCCAA TTTTAGGCCT AACAGATGCA
TTTAAAGCTG ATACCAGAAC AGAAAAAGTA AACCTTGGGG TAGGGATTTA TAAAGACGAA
TCAGGCTCAA CACCTATATT AAAGTCCGTA AAGCTTGCCG AAGAGAAGAT CCTCGCAACA
GAAAACAGCA AAAGTTATCT GGGCATCGAA GGTGTTCAGG CCTATAACCG TGTCGTTCAA
GAGTTACTGT TTGGTGCTGA GCATAGTGTT GTAAAAAATA AGCGTGCCCT AACGGCTCAG
GCTCCTGGCG GAACCGGCTC TTTAAGGGTC GCAGCAGAGT TTCTGGTACG TAATACCGAA
TCTAAAACAA TTTGGGTAAG TAACCCAACT TGGGCAAATC ATCAAAATAT CTTTAAATCT
GCTTCTCTGG GCATTCAGCA GTACCGTTAC TACAATGCTG AAACACATGG TAAAGACTTC
GATGCCATGC TTACCGACCT GTCACAAGCA AAAGCCGGAG ATCTTGTCCT GCTGCATGGC
TGCTGTCATA ACCCAACAGG CATAGATCTT AACGAAACAG AGTGGCAGCG TGTTGCTGAC
CTATGTTTAA AACAAGATCT TGTACCACTG TTTGATTTCG CCTATCAGGG TTTTGGCGTA
GGCATTAATG AAGATGCGAA AGGCTTAAGA ATTGTGGCAG ATACAGTGCC TGAACTATTG
ATAGCAAATT CATTCTCGAA AAACTTCGGT CTTTACAATG AACGAATAGG TGCTGTGACC
TTAGTCGCCG ATACCGAAAC AACCGTAGCC AAGGCATTCA GTCAGGTAAA GAGTACCATT
CGCGGTAATT ATTCAAACCC ACCTGCACAC GGCGCCCTGA TCGTCAGCAC TATCCTCGCC
GATGAAGAGT TAAAGTCATT ATGGGAGTCT GAGCTTAAAG AGATGCGTGA ACGTATTGCA
AAAATGCGTA CACTCTTTGT CGAATCACTG AAAGCGGAAG GTGTCACTCA AGACTTCAGC
TTCATCTCAA GACAAAATGG TATGTTCAGC TTCTCAGGAT TAACGAAAGA GCAGGTCACG
CAGCTCAAAG AGGTGCATGC AGTTTATATC GTAGGATCCG GACGGATCAG TGTAGCCGGT
ATGACTCGAA CCAACATGCC CGTTATCTGT AAAGCCATCG CCAAGGTTCT TGCCTAG
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| Protein sequence | MIFTQVELAP ADPILGLTDA FKADTRTEKV NLGVGIYKDE SGSTPILKSV KLAEEKILAT
ENSKSYLGIE GVQAYNRVVQ ELLFGAEHSV VKNKRALTAQ APGGTGSLRV AAEFLVRNTE
SKTIWVSNPT WANHQNIFKS ASLGIQQYRY YNAETHGKDF DAMLTDLSQA KAGDLVLLHG
CCHNPTGIDL NETEWQRVAD LCLKQDLVPL FDFAYQGFGV GINEDAKGLR IVADTVPELL
IANSFSKNFG LYNERIGAVT LVADTETTVA KAFSQVKSTI RGNYSNPPAH GALIVSTILA
DEELKSLWES ELKEMRERIA KMRTLFVESL KAEGVTQDFS FISRQNGMFS FSGLTKEQVT
QLKEVHAVYI VGSGRISVAG MTRTNMPVIC KAIAKVLA
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