Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2223 |
Symbol | |
ID | 5612632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2680098 |
End bp | 2680925 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640933127 |
Product | Bax protein, putative |
Protein accession | YP_001473960 |
Protein GI | 157375360 |
COG category | [R] General function prediction only |
COG ID | [COG2992] Uncharacterized FlgJ-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACAG GAAGAGTTGG AAAATTAACC GTGGCTATTA GCCTCGTCTT TATTTCGATC ATTGTATTAA AGGTGGTTTT CGTAGAAATC GATGACGATA AAGGAGAGGA GGTCGGCGCA TTAGTCGAAA ATAAACAAGC CCTTAGCCTT ATCCCTGATT TTTCTGCCAT TTCAAATGTT GGCCAAAAGA AGCAAGCTTT TTTCGATTAT TTAAGGCCTT CAATTCGACT TCAAAATGGC ATCATCAATG ATGAGCGTAC TTTCTTACAA AGGTCCAAAC AGCATCTGGA AGATGGTTTA TTACTCACAG ATGCAGAGCT GTATCGTATC GAAGAGATAG CAGATAAGTA TCAATATTCG TCGAGGAGTA TAAACACAAA CACACTGGAC AAATTACTGA TTAGAACCGA CACCATCCCG GAGTCGATGG TTCTTATCCA AGCCGCCAAT GAAACGGGCT GGGGGAGCTC TCGCTTTGCG AAAGAGGGCC TTAACTTCTT TGGACAGTGG TGTTTTAAAA AGGGGTGTGG ACTCGTTCCT CAGTCAAGAA CCGCAGGCAT GTCACATGAA GTTGCGGTAT TTGAATCAGT TGAAGCTTCC GTCGCCTCTT ACATGAGAAA TCTAAACTCC AATGCCGCTT ACTCACTACT GCGCTCCATA AGAGCCGATC TGAGGGCTCA GAATAAACAG CCTCAGGCAA GTGAATTAGT TTGGGGCTTG GTAAACTATT CAGAACGTCA GGAAGCTTAT ATCGATGAGC TCCTGGAAAT GTTACGTCAA AATAAACGGT ACTTGGTGGA GAATCATGAA GAAAGGCCTT CTGTTTAG
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Protein sequence | MKTGRVGKLT VAISLVFISI IVLKVVFVEI DDDKGEEVGA LVENKQALSL IPDFSAISNV GQKKQAFFDY LRPSIRLQNG IINDERTFLQ RSKQHLEDGL LLTDAELYRI EEIADKYQYS SRSINTNTLD KLLIRTDTIP ESMVLIQAAN ETGWGSSRFA KEGLNFFGQW CFKKGCGLVP QSRTAGMSHE VAVFESVEAS VASYMRNLNS NAAYSLLRSI RADLRAQNKQ PQASELVWGL VNYSERQEAY IDELLEMLRQ NKRYLVENHE ERPSV
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